Gene Tmel_0036 details

Gene Information

• Locus tag: Tmel_0036
• ID: 5297164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 39891
• End bp: 40502
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640768286
• Product: thiamine pyrophosphokinase
• Protein accession: YP_001305300
• Protein GI: 150019946
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1564] Thiamine pyrophosphokinase
• TIGRFAM ID: [TIGR01378] thiamine pyrophosphokinase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000794456
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGCCA CTATAGTTTT AAACGGAAAT ACAAACGAAA CTTTTATCAT TAATTCAGAG 
ACAATTATTG CAGTTGATGG TGGTGCAAAA CTTTTAAAAG ACAGAGGAAT TCTCCCAAAA 
GCTATTGTAG GAGATATGGA TTCTCTTGAA AATGAAATAA TAGAGTATTT CAAAAGAAAA 
AACGTTGAAA TAGTTGTATT TCCAGCTGAA AAAGATGAAA CAGATTGTGA ACTAGCGATC 
AGATATGCCA TAGAAAACGG GTATGATGAA ATAGAAATAA TAAATTTTTT TGGCGAAAGA 
CTTGATATGA TATTATCATT ATTTGGTTTA ATGAAAAAAT TCAATGTAAA AATTACTTTA 
AGATCGGAAA AATTAGAGTG TGGTATAATA AAAAAACAAA TGGAAAAAAA AGTAAAAATT 
GGTGAAATAT GGTCCTTTAT TCCGCTTTGT AAAGCAAAAT TCAATCTATA TGGTTTCAAA 
TATCAATTCA ATGGGGAAAT GAAAATAGAC AATCCCATAG GCGTAAGTAA TGAAACCATA 
TCAGAAAATG TAAAGATTGA AGTATTAGAT GGTGAGGTGA TTTATTTTAG ATGGATGAAA 
AAACCGTTGT AA 

 

Protein sequence

MKATIVLNGN TNETFIINSE TIIAVDGGAK LLKDRGILPK AIVGDMDSLE NEIIEYFKRK 
NVEIVVFPAE KDETDCELAI RYAIENGYDE IEIINFFGER LDMILSLFGL MKKFNVKITL 
RSEKLECGII KKQMEKKVKI GEIWSFIPLC KAKFNLYGFK YQFNGEMKID NPIGVSNETI 
SENVKIEVLD GEVIYFRWMK KPL