Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0018 |
Symbol | |
ID | 5296735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 19902 |
End bp | 20936 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640768267 |
Product | inner-membrane translocator |
Protein accession | YP_001305283 |
Protein GI | 150019929 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA AGGTGTCAGC AATACTTATT CCAATTGTTT CAGTGCTAAT AGCACTTTTA ATTTCTACTG TAATTATATT ACTCATTGGA AAAAATCCAT TGGTTGCATA TTCTGCCTTA ATAAAAGGAT CTTTTGGTTC AAAACAGGCA CTAGCAGATA CAATAATTAA AACCACTCCA TTAATATTAA CTGGCCTTGC TGTGGGTTTT GGATTTAGAG CAGGCGTATT TAACATTGGT GCAGAAGGAC AAATGGTAAT GGGAGCACTT ATCGCTGCTA CCTTTGCAGG TAATTTTGGC TTTTTACCTC CTATAATTGC CATTCCACTA ACCATACTTA TTGCAATGTT GGTTGGTGCA GGCTATGCCG CAATTGCAGG TTTTCTTAAA GCAAAAACTG GTGCCCACGA AGTTGTTACA ACCATTATGC TTAACTGGAT TGCCACATAT TTTGCTTCAT ACATGGTAAC CGGTCCTTTA AAAGTAGGAT CAGGTACACC AAAAAGCCCT GAAATAGCAA CATCTGCCCA GCTTCCAATA CTTATGAAAA TAGGCGCTAT AGAACTAAGT TCTGGAATAA TCATTGCTGT AATAGCCGCT ATATTTATGT ACATTTTGCT AAATAAATCC ACTACAGGTT ACGAAATTAA AGCTGTTGGA TTTAACCCAT ATGCTGCTGA ATACGGCGGA ATTTCCGTTG CAAAAAACAT CGTTTTTGCA ATGGCAATAA GCGGTGCATT AGCTGGTCTT GCAGGTGCAA CAGAATTAAT GGGGGTCCAT CACAGATTCT TAGGAGAACT TTCAGGTGGA AAAGGCTTCG ATGGAATTAG CATTGCATTG ATAGGTCAAA ATAATCCTAT TGGGATTATC TTTGCTGCAC TACTCATTGG AGCATTAAGA ACAGGAAGTA ACGAAATGCA ATTTGTTGGT GTCCCAAAAC ACATGGTTAT GATTATTCAA GGTATAGTAA TCTTTCTTGT TGCAGCTGAT AGAATTGTTC GTACTATCAT GATCAGAAAG AAGGTGGAAA AATGA
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Protein sequence | MNKKVSAILI PIVSVLIALL ISTVIILLIG KNPLVAYSAL IKGSFGSKQA LADTIIKTTP LILTGLAVGF GFRAGVFNIG AEGQMVMGAL IAATFAGNFG FLPPIIAIPL TILIAMLVGA GYAAIAGFLK AKTGAHEVVT TIMLNWIATY FASYMVTGPL KVGSGTPKSP EIATSAQLPI LMKIGAIELS SGIIIAVIAA IFMYILLNKS TTGYEIKAVG FNPYAAEYGG ISVAKNIVFA MAISGALAGL AGATELMGVH HRFLGELSGG KGFDGISIAL IGQNNPIGII FAALLIGALR TGSNEMQFVG VPKHMVMIIQ GIVIFLVAAD RIVRTIMIRK KVEK
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