Gene TBFG_13534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13534 
Symbol 
ID5224223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3931573 
End bp3932415 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID640608303 
Productintegral membrane protein YrbE4b 
Protein accessionYP_001289461 
Protein GI148824707 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones381 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones148 
Fosmid unclonability p-value0.00000417284 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTACG ACGTCACTAT CCGGTTTCGC CGTTTCTTTT CGCGGCTGCA GCGGCCGGTC 
GACAACTTCG GTGAGCAGGC GCTGTTCTAC GGCGAAACCA TGCGCTATGT GCCCAACGCC
ATCACCCGCT ACCGGAAGGA GACGGTCCGG CTGGTCGCCG AGATGACGCT GGGCGCCGGA
GCGCTGGTCA TGATCGGCGG CACGGTCGGG GTGGCGGCCT TTTTGACCCT GGCGTCCGGT
GGCGTGATCG CCGTGCAGGG GTATTCGTCG CTGGGCGACA TCGGTATCGA GGCGTTGACC
GGGTTCCTGT CGGCGTTTTT GAACGTCCGC GTTGTCGCGC CGGTGATCGC GGGTATCGCG
CTGGCGGCCA CCATCGGGGC CGGAGCCACC GCGCAGCTGG GTGCCATGCG GGTCTCTGAG
GAGATCGACG CCGTCGAATG CATGGCGGTG CACTCGGTGT CCTATTTGGT GTCAACCCGG
CTGATCGCCG GCCTGGTGGC GATCATTCCG TTGTATTCGT TGTCGGTGCT GGCCGCGTTC
TTCGCCGCTC GTTTCACCAC GGTGTTCGTC AATGGGCAGT CCGCGGGCCT TTATGACCAT
TACTTCAACA CCTTCCTCAT CCCCTCCGAC CTGTTGTGGT CGTTTATGCA AGCCATCGCT
ATGTCGATCG CGGTAATGCT GGTGCATACC TACTACGGCT ACAACGCCAG CGGCGGGTCG
GTTGGGGTCG GGGTCGCGGT CGGGCAGGCC GTACGGACCT CGCTGATCGT GGTTGTTGTC
ATCACCTTGT TCATCTCGCT CGCCGTCTAC GGCGCGTCCG GTAACTTCAA CCTCTCGGGG
TAA
 
Protein sequence
MSYDVTIRFR RFFSRLQRPV DNFGEQALFY GETMRYVPNA ITRYRKETVR LVAEMTLGAG 
ALVMIGGTVG VAAFLTLASG GVIAVQGYSS LGDIGIEALT GFLSAFLNVR VVAPVIAGIA
LAATIGAGAT AQLGAMRVSE EIDAVECMAV HSVSYLVSTR LIAGLVAIIP LYSLSVLAAF
FAARFTTVFV NGQSAGLYDH YFNTFLIPSD LLWSFMQAIA MSIAVMLVHT YYGYNASGGS
VGVGVAVGQA VRTSLIVVVV ITLFISLAVY GASGNFNLSG