| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13241 |
|---|
| Symbol | |
|---|
| ID | 5223930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 3604019 |
|---|
| End bp | 3605137 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640608010 |
|---|
| Product | isochorismate synthase entC |
|---|
| Protein accession | YP_001289168 |
|---|
| Protein GI | 148824414 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 387 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 204 |
|---|
| Fosmid unclonability p-value | 0.732317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAC ACGTGGCAAC CTTGCACCCA GAACCACCGT TCGCACTGTG CGGACCAAGA
GGCACCCTGA TTGCCCGCGG GGTGCGGACA CGATACTGCG ACGTGCGGGC CGCGCAAGCG
GCACTTCGCT CAGGTACAGC ACCAATACTG TTGGGCGCGT TGCCTTTCGA CGTGAGCAGA
CCCGCCGCAT TGATGGTGCC GGATGGCGTG CTGCGGGCCC GGAAGCTGCC TGACTGGCCG
ACCGGCCCGC TGCCCAAGGT ACGCGTCGCC GCCGCCCTTC CGCCACCTGC CGACTACCTG
ACCCGGATCG GCCGCGCACG GGATCTGCTG GCCGCCTTCG ACGGCCCGTT GCACAAAGTG
GTGCTCGCGC GCGCCGTGCA ACTGACCGCC GATGCTCCGC TGGACGCGCG GGTACTGTTG
CGCAGGTTGG TCGTCGCCGA CCCGACCGCT TACGGCTATC TCGTCGACCT CACCTCTGCG
GGCAACGACG ACACCGGGGC AGCCCTGGTC GGCGCCAGCC CAGAGCTTCT GGTCGCACGA
TCCGGCAATC GCGTCATGTG CAAGCCATTT GCCGGCTCAG CCCCACGCGC CGCCGACCCC
AAACTCGACG CCGCCAACGC GGCCGCACTA GCCAGTTCGG CCAAGAACCG ACACGAACAC
CAATTGGTCG TCGACACGAT GCGGGTAGCC CTAGAGCCAC TATGCGAGGA CCTGACAATC
CCAGCCCAGC CCCAGTTGAA CCGCACCGCA GCCGTTTGGC ATCTGTGCAC CGCGATCACC
GGCCGGCTGC GCAACATCTC GACGACGGCA ATCGATCTGG CTTTGGCGCT ACATCCCACC
CCGGCGGTTG GTGGGGTCCC GACAAAAGCT GCCACCGAGC TCATCGCCGA ACTCGAGGGC
GACCGTGGCT TCTACGCCGG CGCGGTTGGT TGGTGCGACG GCCGGGGCGA CGGCCATTGG
GTGGTGTCTA TCCGGTGCGC GCAACTTTCG GCTGATCGAC GCGCAGCCCT TGCGCACGCT
GGCGGTGGCA TCGTCGCCGA ATCAGACCCC GATGACGAAC TTGAAGAAAC CACAACGAAG
TTCGCCACGA TATTGACCGC ACTGGGAGTT GAGCAGTGA
|
|---|
| Protein sequence | MSAHVATLHP EPPFALCGPR GTLIARGVRT RYCDVRAAQA ALRSGTAPIL LGALPFDVSR
PAALMVPDGV LRARKLPDWP TGPLPKVRVA AALPPPADYL TRIGRARDLL AAFDGPLHKV
VLARAVQLTA DAPLDARVLL RRLVVADPTA YGYLVDLTSA GNDDTGAALV GASPELLVAR
SGNRVMCKPF AGSAPRAADP KLDAANAAAL ASSAKNRHEH QLVVDTMRVA LEPLCEDLTI
PAQPQLNRTA AVWHLCTAIT GRLRNISTTA IDLALALHPT PAVGGVPTKA ATELIAELEG
DRGFYAGAVG WCDGRGDGHW VVSIRCAQLS ADRRAALAHA GGGIVAESDP DDELEETTTK
FATILTALGV EQ
|
|---|
| |