Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13214 |
Symbol | |
ID | 5223903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3575029 |
End bp | 3576051 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640607983 |
Product | hypothetical protein |
Protein accession | YP_001289141 |
Protein GI | 148824387 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 473 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 197 |
Fosmid unclonability p-value | 0.303066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATAGGC GGATATTGAC CTTGATGGTC GCGCTGGTGC CGATCGTGGT ATTCGGCGTG TTGCTCGCCG TGGTAACCGT GCCGTTTGTG GCGCTGGGAC CCGGCCCAAC GTTCGACACG CTCGGCGAGA TAGACGGCAA GCAGGTGGTC CAGATCGTGG GCACCCAGAC CTACCCGACG TCAGGTCACC TCAACATGAC GACGGTCTCC CAGCGCGACG GTCTAACCCT GGGTGAAGCC CTGGCCCTGT GGCTTTCGGG TCAAGAACAG TTGATGCCAC GCGACCTCGT CTACCCTCCG GGCAAGTCGC GGGAAGAGAT CGAAAATGAC AACGCCGCTG ATTTCAAGCG CTCCGAGGCC GCCGCTGAGT ACGCCGCTCT GGGGTACCTG AAGTATCCGA AAGCAGTCAC CGTCGCCTCG GTCATGGATC CAGGGCCATC GGTGGACAAG CTGCAGGCCG GTGACGCCAT CGACGCCGTC GACGGCACTC CGGTGGGCAA CCTCGACCAG TTCACCGCGC TGTTGAAGAA CACGAAACCG GGCCAGGAGG TGACGATCGA CTTCCGCCGC AAGAACGAGC CGCCCGGCAT CGCGCAGATC ACGCTGGGCA AGAATAAGGA TCGCGACCAA GGCGTCCTGG GCATAGAGGT GGTGGACGCG CCGTGGGCGC CGTTTGCCGT GGACTTCCAC CTCGCCAACG TCGGCGGCCC TTCGGCCGGA CTGATGTTCA GTCTGGCCGT CGTCGACAAG CTCACCAGTG GCCACCTGGT TGGGTCGACG TTCGTCGCAG GCACCGGCAC GATCGCCGTC GATGGCAAGG TGGGCCAGAT CGGTGGCATC ACCCACAAGA TGGCCGCTGC TCGAGCGGCC GGCGCGACGG TGTTTCTGGT GCCCGCGAAG AACTGCTACG AGGCAAGTTC CGACAGCCCG CCCGGTTTGA AGTTGGTGAA GGTCGAGACG CTTAGCCAGG CGGTGGACGC GCTGCACGCG ATGACGTCGG GCTCGCCGAC GCCGAGCTGC TAG
|
Protein sequence | MNRRILTLMV ALVPIVVFGV LLAVVTVPFV ALGPGPTFDT LGEIDGKQVV QIVGTQTYPT SGHLNMTTVS QRDGLTLGEA LALWLSGQEQ LMPRDLVYPP GKSREEIEND NAADFKRSEA AAEYAALGYL KYPKAVTVAS VMDPGPSVDK LQAGDAIDAV DGTPVGNLDQ FTALLKNTKP GQEVTIDFRR KNEPPGIAQI TLGKNKDRDQ GVLGIEVVDA PWAPFAVDFH LANVGGPSAG LMFSLAVVDK LTSGHLVGST FVAGTGTIAV DGKVGQIGGI THKMAAARAA GATVFLVPAK NCYEASSDSP PGLKLVKVET LSQAVDALHA MTSGSPTPSC
|
| |