Gene TBFG_12988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12988 
Symbol 
ID5223674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3339206 
End bp3341419 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content65% 
IMG OID640607754 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_001288917 
Protein GI148824163 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones250 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones213 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCGT TAAGCGATCG GCTCGATCGC GTCCTCGGCG CCACGGCAGC CGATGCCCTC 
GACGAGCAGT TCGGCATGCG GACCGTCGAC GACCTGCTCC GCCACTACCC GCGCAGCTAC
GTCGAGGGCG CGGCGCGGGT GGGTATCGGT GACGCGCGAC CGGAAGCTGG CGAGCACATC
ACCATCGTCG ACGTGATCAC CGATACGTAT TCGTTTCCGA TGAAAAAGAA GCCGAATCGG
AAATGTCTGC GCATCACCGT CGGCGGCGGC CGCAACAAGG TGACGGCCAC GTTCTTCAAC
GCGGACTACA TCATGCGGGA CCTCACCAAG CACACGAAGG TGATGCTCTC CGGGGAAGTC
GGCTACTACA AGGGCGCGAT GCAGCTCACG CATCCGGCGT TTCTCATCCT CGACTCGCCG
GACGGGAAGA ACCACGGCAC CAGGTCGCTC AAAAGTATCG CTGATGCCTC CAAGGCCATC
AGCGGTGAAT TGGTCGTGGA GGAGTTCGAG CGTCGTTTCT TCCCGATCTA TCCGGCCAGC
ACAAAAGTGC AGAGCTGGGA CATCTTCAAA TGCGTGCGGC AGGTGCTCGA TGTTCTCGAC
CGGGTCGATG ATCCGTTGCC CGCGGAACTA CGCGCCAAGC ACGGCCTGAT CCCCGAGGAC
GAGGCACTGC GCGCCATTCA CCTTGCCGAA AGCCAGTCGT TACGCGAGCG CGCCCGGGAA
CGCCTGACCT TCGACGAGGC CGTGGGTCTG CAGTGGGCGC TGGTGGCCCG ACGGCACGGT
GAACTGTCGG AATCCGGGCC CTCGGCGGCC TGGAAATCTA ACGGTCTTGC CGCTGAGCTA
CTGCGGCGGT TGCCTTTTGA GCTGACGGCG GGACAGCGTG AGGTGCTCGA CGTGTTGTCC
GACGGGCTCG CGGCGAACCG CCCGCTGAAT CGCCTGCTGC AAGGCGAAGT GGGCTCGGGC
AAAACGATCG TTGCGGTGTT GGCGATGCTG CAGATGGTGG ACGCGGGTTA CCAGTGTGCC
CTGCTGGCGC CAACGGAAGT CCTTGCCGCA CAACACTTGC GATCGATCCG CGATGTCCTA
GGGCCGCTGG CCATGGGCGG CCAACTGGGA GGCGCCGAAA ACGCCACCCG GGTGGCACTG
CTCACCGGTT CGATGACGGC AGGGCAGAAG AAGCAAGTTC GCGCCGAAAT CGCCAGCGGT
CAGGTCGGCA TCGTCATCGG CACGCACGCG CTGCTGCAGG AGGCCGTCGA CTTTCACAAC
CTGGGCATGG TGGTGGTCGA CGAGCAACAC CGGTTTGGTG TCGAGCAGCG AGATCAGTTG
CGCGCCAAGG CCCCCGCCGG CATTACCCCG CACCTGCTGG TGATGACCGC GACGCCGATA
CCGCGCACGG TCGCGCTGAC CGTCTATGGC GACCTGGAAA CCTCTACGCT GCGCGAACTT
CCGCTCGGGC GCCAGCCGAT TGCCACCAAC GTCATCTTTG TCAAGGACAA GCCCGCCTGG
CTCGACCGCG CCTGGCGGCG CATCATCGAA GAGGCTGCCG CCGGCCGCCA GGCCTATGTG
GTGGCGCCCC GCATCGATGA GTCCGACGAC ACCGACGTTC AAGGCGGCGT CCGACCATCG
GCCACTGCCG AAGGCCTGTT CTCCCGGTTG CGTTCCGCCG AGCTCGCAGA GTTGCGGTTG
GCGCTCATGC ATGGACGGTT GTCGGCCGAC GACAAGGACG CTGCGATGGC GGCTTTCCGG
GCCGGTGAGG TCGATGTGCT GGTGTGCACC ACGGTCATTG AGGTTGGCGT CGATGTCCCC
AACGCTACGG TCATGCTGGT GATGGACGCC GACCGGTTCG GCATCAGCCA ATTGCACCAG
CTGCGCGGCC GCATCGGGCG CGGCGAACAT CCCAGCGTGT GTCTGCTGGC CAGCTGGGTG
CCGCCGGATA CGCCGGCGGG TCAGCGGCTG CGTGCGGTCG CCGGGACAAT GGACGGGTTC
GCCCTCGCCG ATCTGGATCT GAAGGAGCGC AAGGAGGGAG ATGTGCTGGG CCGCAACCAA
TCCGGCAAGG CCATCACGCT GCGGTTGCTG TCATTGGCCG AACACGAGGA ATACATAGTG
GCCGCGCGGG ACTTCTGCAT CGAGGCTTAC AAGAACCCCA CAGACCCCGC ATTGGCGCTG
ATGGCCGCGC GATTCACCAG CACCGACCGC ATCGAATACT TAGATAAGTC ATGA
 
Protein sequence
MASLSDRLDR VLGATAADAL DEQFGMRTVD DLLRHYPRSY VEGAARVGIG DARPEAGEHI 
TIVDVITDTY SFPMKKKPNR KCLRITVGGG RNKVTATFFN ADYIMRDLTK HTKVMLSGEV
GYYKGAMQLT HPAFLILDSP DGKNHGTRSL KSIADASKAI SGELVVEEFE RRFFPIYPAS
TKVQSWDIFK CVRQVLDVLD RVDDPLPAEL RAKHGLIPED EALRAIHLAE SQSLRERARE
RLTFDEAVGL QWALVARRHG ELSESGPSAA WKSNGLAAEL LRRLPFELTA GQREVLDVLS
DGLAANRPLN RLLQGEVGSG KTIVAVLAML QMVDAGYQCA LLAPTEVLAA QHLRSIRDVL
GPLAMGGQLG GAENATRVAL LTGSMTAGQK KQVRAEIASG QVGIVIGTHA LLQEAVDFHN
LGMVVVDEQH RFGVEQRDQL RAKAPAGITP HLLVMTATPI PRTVALTVYG DLETSTLREL
PLGRQPIATN VIFVKDKPAW LDRAWRRIIE EAAAGRQAYV VAPRIDESDD TDVQGGVRPS
ATAEGLFSRL RSAELAELRL ALMHGRLSAD DKDAAMAAFR AGEVDVLVCT TVIEVGVDVP
NATVMLVMDA DRFGISQLHQ LRGRIGRGEH PSVCLLASWV PPDTPAGQRL RAVAGTMDGF
ALADLDLKER KEGDVLGRNQ SGKAITLRLL SLAEHEEYIV AARDFCIEAY KNPTDPALAL
MAARFTSTDR IEYLDKS