Gene TBFG_12838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12838 
Symbol 
ID5223524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3143408 
End bp3144352 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID640607604 
Producthypothetical protein 
Protein accessionYP_001288767 
Protein GI148824013 
COG category[S] Function unknown 
COG ID[COG5551] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones317 
Plasmid unclonability p-value0.0652997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones230 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGCTC GCCGAGGCGG CATCAGAAGG ACGGATCTGC TACGTCGGAG TGGCCAGCCC 
CGAGGCCGAC ATCGCGCGAG TGCGGCGGAA TCAGGCTTGA CCTGGATTTC ACCAACGCTT
ATTCTGGTGG GCTTTTCTCA CCGAGGAGAT CGCCGGATGA CGGAACACTT GTCGCGATTG
ACGCTGACTC TAGAGGTTGA TGCCCCGCTC GAACGCGCGA GGGTGGCGAC CCTGGGGCCG
CATCTTCATG GCGTCCTCAT GGAGTCGATC CCGGCCGATT ATGTGCAGAC CCTCCACACC
GTGCCGGTGA ACCCGTACAG TCAGTACGCG CTGGCCCGCT CGACCACATC TTTGGAGTGG
AAGATCAGCA CGCTGACGAA CGAGGCGCGG CAGCAGATCG TCGGACCTAT CAACGACGCG
GCGTTTGCGG GTTTTCGGCT CCGTGCGAGC GGGATAGCGA CACAGGTCAC GTCGCGATCG
CTGGAGCAGA ACCCGCTAAG TCAATTCGCG CGCATTTTCT ACGCGCGGCC CGAGACGCGC
AAGTTCCGGG TCGAGTTCCT GACGCCTACC GCATTCAAGC AATCCGGCGA GTACGTGTTC
TGGCCGGATC CGCGGCTCGT GTTTCAGAGT CTCGCGCAGA AGTACGGTGC AATTGTCGAC
GGCGAAGAGC CCGATCCTGG CCTCATCGCC GAATTCGGTC AGTCGGTTCG CCTCTCCGCG
TTCCGGGTGG CGTCGGCCCC GTTCGCGGTG GGCGCGGCGC GTGTTCCCGG CTTCACCGGC
TCGGCCACGT TCACCGTCCG CGGTGTGGAT ACTTTTGCGA GCTATATCGC GGCGCTGTTG
TGGTTCGGGG AGTTCTCGGG ATGCGGAATA AAGGCATCCA TGGGGATGGG CGCGATCCGG
GTCCAGCCAC TGGCACCGAG GGAAAAATGC GTACCGAAGC CATGA
 
Protein sequence
MAARRGGIRR TDLLRRSGQP RGRHRASAAE SGLTWISPTL ILVGFSHRGD RRMTEHLSRL 
TLTLEVDAPL ERARVATLGP HLHGVLMESI PADYVQTLHT VPVNPYSQYA LARSTTSLEW
KISTLTNEAR QQIVGPINDA AFAGFRLRAS GIATQVTSRS LEQNPLSQFA RIFYARPETR
KFRVEFLTPT AFKQSGEYVF WPDPRLVFQS LAQKYGAIVD GEEPDPGLIA EFGQSVRLSA
FRVASAPFAV GAARVPGFTG SATFTVRGVD TFASYIAALL WFGEFSGCGI KASMGMGAIR
VQPLAPREKC VPKP