| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12739 |
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| Symbol | dapF |
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| ID | 5223425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3050886 |
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| End bp | 3051755 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640607505 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001288668 |
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| Protein GI | 148823914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 332 |
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| Plasmid unclonability p-value | 0.142767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 203 |
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| Fosmid unclonability p-value | 0.397169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCG CGAAGGGCCA CGGTACCCAG AACGACTTCG TGTTGCTGCC TGACGTCGAC
GCCGAGTTGG TGCTCACCGC TGCCCGGGTG GCGGCATTGT GCGACCGGCG GAAGGGGCTG
GGCGCCGACG GGGTGTTGCG GGTTACGACC GCCGGAGCCG CCCAGGCGGT AGGAGTGCTG
GACAGCCTGC CCGAGGGTGT CCGCGTGACC GACTGGTACA TGGATTACCG CAACGCCGAC
GGGTCGGCAG CCCAGATGTG CGGCAACGGT GTGCGAGTGT TCGCGCACTA CTTGCGTGCC
AGTGGCCTGG AGGTTCGCGA CGAGTTCGTC GTAGGGTCAC TGGCCGGACC GCGACCAGTC
ACCTGCCACC ACGTCGAGGC GGCCTACGCC GACGTCTCCG TCGACATGGG CAAGGCCAAC
AGATTGGGCG CAGGGGAGGC TGTTGTTGGT GGCAGGCGGT TTCACGGCCT GGCCGTCGAT
GTGGGTAACC CGCATCTGGC GTGCGTGGAT TCCCAGCTGA CCGTCGACGG CCTGGCGGCA
TTGGACGTGG GTGCGCCGGT GAGTTTCGAT GGTGCGCAGT TCCCCGACGG GGTCAATGTC
GAGGTACTCA CCGCGCCGGT CGACGGGGCG GTCTGGATGC GGGTTCACGA ACGCGGCGTG
GGGGAAACCC GCTCGTGTGG CACCGGGACG GTTGCGGCCG CGGTCGCCGC GTTGGCGGCG
GTGGGCTCGC CGACCGGAAC GCTCACCGTG CACGTGCCGG GCGGAGAGGT CGTGGTTACC
GTCACCGATG CCACCAGCTT CCTGCGTGGG CCGTCAGTGT TGGTGGCCCG CGGAGATCTC
GCTGACGATT GGTGGAACGC GATGGGGTGA
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| Protein sequence | MIFAKGHGTQ NDFVLLPDVD AELVLTAARV AALCDRRKGL GADGVLRVTT AGAAQAVGVL
DSLPEGVRVT DWYMDYRNAD GSAAQMCGNG VRVFAHYLRA SGLEVRDEFV VGSLAGPRPV
TCHHVEAAYA DVSVDMGKAN RLGAGEAVVG GRRFHGLAVD VGNPHLACVD SQLTVDGLAA
LDVGAPVSFD GAQFPDGVNV EVLTAPVDGA VWMRVHERGV GETRSCGTGT VAAAVAALAA
VGSPTGTLTV HVPGGEVVVT VTDATSFLRG PSVLVARGDL ADDWWNAMG
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