| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12693 |
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| Symbol | hemE |
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| ID | 5223379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3005893 |
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| End bp | 3006966 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640607459 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001288622 |
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| Protein GI | 148823868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 233 |
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| Plasmid unclonability p-value | 0.000000000799179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 218 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCC GTCGCGACCT TCCGCAGTCG CCGTATCTGG CCGCCGTCAC CGGCCGCAAG
CCCAGCCGGG TGCCGGTGTG GTTCATGCGG CAGGCCGGGC GCTCGTTGCC CGAATACCGG
GCGCTGCGCG AGCGGTACAG CATGCTGGCG GCCTGTTTCG AACCGGACGT GGCCTGTGAG
ATTACCCTGC AGCCGATACG CCGCTACGAC GTCGACGCGG CCATCCTGTT CTCCGACATC
GTGGTGCCGC TACGGGCGGC CGGCGTGGAT TTGGACATCG TCGCCGACGT TGGGCCGGTG
ATCGCGGACC CGGTGCGCAC CGCCGCCGAT GTCGCCGCCA TGAAACCACT TGATCCACAA
GCGATTCAAC CGGTATTGGT GGCGGCTTCG TTGTTGGTCG CTGAGCTTGG CGACGTGCCG
CTGATCGGTT TCGCCGGCGC GCCGTTCACG CTGGCCTCCT ACCTCGTGGA GGGCGGACCG
AGCCGCCATC ACGCCCACGT CAAGGCGATG ATGTTGGCCG AGCCGGCGAG CTGGCACGCG
CTGATGGCCA AGCTGACCGA CCTCACCATC GCGTTTCTGG TCGGCCAAAT CGACGCGGGG
GTGGACGCCA TCCAGGTATT CGACTCCTGG GCCGGGGCGC TCTCGCCGAT CGACTACCGC
CAGTACGTGT TGCCGCACAG CGCCCGGGTG TTCGCTGCGC TGGGCGAGCA TGGCGTGCCG
ATGACGCACT TCGGGGTTGG GACCGCCGAA TTGCTGGGCG CGATGTCGGA GGCCGTGACA
GCCGGGGAGC GGCCAGGCCG AGGGGCCGTC GTCGGCGTGG ACTGGCGGAC CCCGCTGACC
GACGCCGCCG CCCGGGTGGT GCCCGGCACG GCGTTACAGG GCAACCTCGA TCCGGCGGTG
GTCCTGGCGG GCTGGCCGGC GGTGGAACGT GCCGCACGTG CCGTTGTCGA CGACGGACGC
CGCGCCGTCG ACGCCGGTGC GGCCGGCCAT ATCTTCAACC TCGGCCACGG GGTGCTGCCA
GAAAGCGATC CCGCGGTGCT GGCCGACCTG GTCTCGCTCG TACACTCGCT ATGA
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| Protein sequence | MSTRRDLPQS PYLAAVTGRK PSRVPVWFMR QAGRSLPEYR ALRERYSMLA ACFEPDVACE
ITLQPIRRYD VDAAILFSDI VVPLRAAGVD LDIVADVGPV IADPVRTAAD VAAMKPLDPQ
AIQPVLVAAS LLVAELGDVP LIGFAGAPFT LASYLVEGGP SRHHAHVKAM MLAEPASWHA
LMAKLTDLTI AFLVGQIDAG VDAIQVFDSW AGALSPIDYR QYVLPHSARV FAALGEHGVP
MTHFGVGTAE LLGAMSEAVT AGERPGRGAV VGVDWRTPLT DAAARVVPGT ALQGNLDPAV
VLAGWPAVER AARAVVDDGR RAVDAGAAGH IFNLGHGVLP ESDPAVLADL VSLVHSL
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