Gene TBFG_12605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12605 
Symbol 
ID5223287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2924321 
End bp2925994 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content67% 
IMG OID640607367 
Productlipoprotein 
Protein accessionYP_001288534 
Protein GI148823780 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones308 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones205 
Fosmid unclonability p-value0.979525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCCC GCCGCCGGCG TCATACGCGC ATCGCCGGCC TGCGAGTCGT TGGTACCGCG 
ACGTTGGTCG CCGCAACCAC GCTGACCGCG TGTTCGGGCA GCGCCGCGGC TCAGATCGAC
TACGTGGTCG ACGGCGCGCT GGTCACCTAC AACACCAATA CCGTCATCGG TGCCGCGTCG
GCCGGGGCGC AGGCATTCGC CCGGACTCTC ACCGGGTTTG GCTATCACGG CCCCGACGGC
CAAGTGGTGG CTGACCGCGA CTTCGGAACG GTCTCGGTGG TGGAGGGGTC GCCGTTGATC
CTCGACTACC AGATCTCCGA CGACGCCGTC TATTCCGACG GCAGGCCGGT GACCTGTGAC
GACCTGGTAT TGGCCTGGGC GGCCCAATCC GGCCGCTTTC CCGGCTTCGA CGCTGCTACG
CAGGCCGGCT ATGTCGACAT CGCCAACATC GAGTGCACGG CGGGGCAGAA AAAGGCCCGG
GTGTCGTTCA TCCCGGATCG CAGTGTCGTT GACCACTCCC AGCTGTTCAC CGCGACGTCG
CTGATGCCGT CGCACGTGAT CGCCGACCAG CTGCACATCG ATGTTACCGC GGCGTTGCTA
AGCAACAACG TGTCAGCGGT GGAACAGATT GCGCGACTGT GGAATTCCAC GTGGGACCTC
AAGCCGGGCC GCAGCCACGA CGAAGTCCGC AGCCGCTTCC CCTCGTCGGG ACCGTACAAG
ATCGAATCCG TCCTGGACGA TGGCGCCGTG GTGCTCGTCG CCAATGATCG TTGGTGGGGC
ACCAAGGCGA TCACGAAGCG GATCACCGTC TGGCCGCAGG GAGCCGATAT CCAAGACCGG
GTCAACAACC GCAGCGTCGA CGTGGTCGAC GTCGCGGCCG GTTCATCGGG ATCCCTGGTA
ACCCCCGACA GCTACCAGCG CACCGACTAC CCGTCGGCCG GGATCGAGCA GCTGATCTTC
GCACCACAAG GTTCACTCGC GCAAAGCCGC ACCCGCCGCG CGCTCGCGTT GTGTGTACCC
CGGGACGCGA TCGCTCGGGA TGCCGGGGTT CCGATTGCCA ACTCGCGGCT GTCCCCGGCG
ACCGACGATG CCCTCACCGA TGCCGACGGC GCCGCCGAAG CACGTCAGTT CGGCCGGGTG
GACCCCGCCG CCGCTCGCGA CGCGCTGGGT GGTACGCCGC TGACCGTGCG GATCGGCTAC
GGCAGGCCCA ACGCTCGGTT GGCGGCCACC ATCGGAACCA TTGCCGACGC CTGCGCCCCG
GCCGGGATCA CCGTTTCGGA TGTGACGGTG GACACACCCG GACCGCAAGC GCTGCGGGAC
GGAAAGATTG ACGTATTGTT GGCGAGCACC GGTGGGGCCA CCGGCAGCGG ATCGAGCGGA
TCGTCTGCGA TGGATGCCTA TGACTTGCAC AGCGGCAACG GAAACAATCT ATCGGGGTAC
GCAAACGCTC AGATCGACGG CATCATCAGC GCGCTCGCGG TGTCGGCCGA CCCCGCCGAG
CGGGCCAGGT TGCTTGCCGA GGCCGCGCCG GTGCTCTGGG ATGAGATGCC AACCTTGCCG
TTGTACCGGC AGCAGCGCAC GTTGTTGATG TCGACGAAAA TGTATGCGGT GAGCAGGAAT
CCGACGCGAT GGGGGGCAGG GTGGAACATG GATCGCTGGG CGCTGGCGCG GTGA
 
Protein sequence
MAPRRRRHTR IAGLRVVGTA TLVAATTLTA CSGSAAAQID YVVDGALVTY NTNTVIGAAS 
AGAQAFARTL TGFGYHGPDG QVVADRDFGT VSVVEGSPLI LDYQISDDAV YSDGRPVTCD
DLVLAWAAQS GRFPGFDAAT QAGYVDIANI ECTAGQKKAR VSFIPDRSVV DHSQLFTATS
LMPSHVIADQ LHIDVTAALL SNNVSAVEQI ARLWNSTWDL KPGRSHDEVR SRFPSSGPYK
IESVLDDGAV VLVANDRWWG TKAITKRITV WPQGADIQDR VNNRSVDVVD VAAGSSGSLV
TPDSYQRTDY PSAGIEQLIF APQGSLAQSR TRRALALCVP RDAIARDAGV PIANSRLSPA
TDDALTDADG AAEARQFGRV DPAAARDALG GTPLTVRIGY GRPNARLAAT IGTIADACAP
AGITVSDVTV DTPGPQALRD GKIDVLLAST GGATGSGSSG SSAMDAYDLH SGNGNNLSGY
ANAQIDGIIS ALAVSADPAE RARLLAEAAP VLWDEMPTLP LYRQQRTLLM STKMYAVSRN
PTRWGAGWNM DRWALAR