Gene TBFG_12549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12549 
Symbol 
ID5223231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2866193 
End bp2867584 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content70% 
IMG OID640607311 
Producthypothetical protein 
Protein accessionYP_001288478 
Protein GI148823724 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones431 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones180 
Fosmid unclonability p-value0.0306994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCTCG CGCACCGGGT CGCCAGCAGC CGCGACACGC CGTCGTCCAG TGCCACACCG 
AATGCGGTGT CGGGCTCGGC GTCAAACGCT GCCGATCGGC CTTGCCTCGT CAGGCCGCCG
ACAGCACCGC CCTGGGCTCA CGGTCCGCGG CTCCGCCGGG ATCCGACCGG CGGCGGCTCA
ACCCCCTCGA TCGTCTTGAG CCGGTCGACA GACCGATCGA AAGACGGCCA CCGGATCGTC
CCGGCAGGGG CGAGGAAGTC CGGCGTCCGA GCAAGCACCG GGCGATTGCC CTCAACGCGG
AAGACAACCC GATCACCCGA TTGCAGGCCG AGCGCGTCGC GCACCGCTTT CGGAACCGTC
ACCTGCCCCT TCGACGTGAC GATGGGTTCG TCGGAGTGCC TGCTTCACCG TTGCCGTACG
CCGCCCGTAC CCTCACACTC TGTGGAGCTG CTCGTCGCCG CCAACCCCGC TGAAGACTCG
CGCCTGCCCT ACCTGATCCG GCTGCCGGTG GGCGCGGGAC TGGTCTTCGC CACCTCAGAC
GTGTGGCCGC GCACCAAGGC GCTGTATTGC CATCGCCTCG ACATCGCCGA CTGGCCCGCC
GACCCCGTCG TCGTCGACCG GGTCGAGCTA CGCAGCTGCA GCCGCCGGGG CGCGGCCATC
GACGTCGTCG CCGCCCGCGC GCGGGAGAAC CGATCGCAAC TGGTGCACAC CATGGCGCGC
GGCCGCCAGG TGGTGTTCTG GCAGAGCCCC AAAACGCGCA AACAGTCGCG GCCGGGCGTG
CGCACCCCCA CCGCCCGCGC CGCCGGCATC CCCGAGCTGC ACATCGTCGT CGACGCCCAC
GAACGCTACC CCTACACCTT TGCCGACAAA CCCGCGAAGA CGACGCGGGA AGCCCTGCCC
TGCGGCGACT ACGGCCTGAA AGTGGCCGGC CAACTCGTGG CGGCCGTCGA GCGTAAAGCG
TTGGCGGACC TTACTTCTGG CGTGCTGAAC GGCAACCTGA AATACCAACT GACCGAACTG
GCCGCGCTGC CACGGGCCGC CGTGGTGGTC GAGGACCGCT ACTCGGAGAT CTTCGCGCAC
TCCTTCGCCC GCCCGACGGC GATCGCCGAT GGGCTGGCCG AATTGCAGAT CGGCTTTCCC
AACGTGCCGA TCGTGTTCTG CCAAACCCGC AAGCTCGCCC AGGAATACAC CTACCGCTAT
CTAGCCGCCG CCCTCACCTG GTTCGTCGAC GATGCCGACG CCACCACGGT TTTCGAGCCG
GCTGCCGCCG AGCCCGAGCC CAGCAGCGCC GAGCTGCGCG CGTGGGCCAA AAGCGTCGGC
CTGCCGGTGT CCGACCGGGG GCGCCTGCGC CCGCAGATCC TGCAGGCCTG GCGAGCCGCC
CATCCCCGGT GA
 
Protein sequence
MHLAHRVASS RDTPSSSATP NAVSGSASNA ADRPCLVRPP TAPPWAHGPR LRRDPTGGGS 
TPSIVLSRST DRSKDGHRIV PAGARKSGVR ASTGRLPSTR KTTRSPDCRP SASRTAFGTV
TCPFDVTMGS SECLLHRCRT PPVPSHSVEL LVAANPAEDS RLPYLIRLPV GAGLVFATSD
VWPRTKALYC HRLDIADWPA DPVVVDRVEL RSCSRRGAAI DVVAARAREN RSQLVHTMAR
GRQVVFWQSP KTRKQSRPGV RTPTARAAGI PELHIVVDAH ERYPYTFADK PAKTTREALP
CGDYGLKVAG QLVAAVERKA LADLTSGVLN GNLKYQLTEL AALPRAAVVV EDRYSEIFAH
SFARPTAIAD GLAELQIGFP NVPIVFCQTR KLAQEYTYRY LAAALTWFVD DADATTVFEP
AAAEPEPSSA ELRAWAKSVG LPVSDRGRLR PQILQAWRAA HPR