Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12548 |
Symbol | |
ID | 5223230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2865069 |
End bp | 2865989 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640607310 |
Product | restriction system protein mrr |
Protein accession | YP_001288477 |
Protein GI | 148823723 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 410 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 176 |
Fosmid unclonability p-value | 0.00923915 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATCC CTGATGCCCA GACGTTGATG CGGCCGATTC TCGCGTATCT TGCCGATGGA CAAGCGAAGT CGGCCAAGGA CGTCATCGCG GCGATGTCCG ACGAGTTCGG TCTGTCCGAC GACGAGCGGG CGCAGATGTT GCCCAGCGGT CGGCAAAGGA CCATGTACGA CAGGGTGCAC TGGTCTCTCA CTCACATGTC GCAGGCCGGA TTGCTCGACC GTCCCACGCG GGGCCACGTC CAGGTCACGG ACACGGGCCG TCAAGTCCTG AAGGCGCATC CCGAGCGCGT CGACATGGCT GTGCTGCGGG AGTTCCCGTC GTACATCGCT TTTCGTGAGC GAACCAAAGC CAAGCAGCCA GTCGACGCGA CCGCCAAGCG ACCGTCCGGG GACGATGTGC AGGTCTCACC CGAGGATCTC ATCGACGCTG CGCTTGCGGA GAACCGGGCA GCCGTCGAGG GGGAGATCCT GAAGAAGGCA CTCACGTTGT CGCCCACCGG GTTTGAAGAT CTGGTTATCA GACTTTTGGA GGCGATGGGT TACGGGCGAG CCGGCGCGGT GGAACGGACG AGTGCCTCCG GTGACGCTGG CATCGACGGA ATCATCAGCC AGGACCCGCT CGGGCTGGAC CGCATCTACG TGCAGGCCAA GCGATACGCC GTCGACCAAA CGATTGGCCG GCCGAAGATC CACGAGTTCG CCGGCGCCCT CCTGGGCAAG CAGGGCGACC GGGGCGTCTA CATCACCACG TCATCGTTTT CCCGCGGTGC CCGCGAGGAA GCTGAGCGGA TCAACGCCCG GATCGAACTC ATCGACGGCG CTCGGCTGGC CGAGCTGCTC GTGCGGTATC GAGTCGGTGT CCAGGCGGTG CAGACCGTCG AACTCTTACG GCTCGACGAG GACTTTTTTG ATGGCCTGTA A
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Protein sequence | MTIPDAQTLM RPILAYLADG QAKSAKDVIA AMSDEFGLSD DERAQMLPSG RQRTMYDRVH WSLTHMSQAG LLDRPTRGHV QVTDTGRQVL KAHPERVDMA VLREFPSYIA FRERTKAKQP VDATAKRPSG DDVQVSPEDL IDAALAENRA AVEGEILKKA LTLSPTGFED LVIRLLEAMG YGRAGAVERT SASGDAGIDG IISQDPLGLD RIYVQAKRYA VDQTIGRPKI HEFAGALLGK QGDRGVYITT SSFSRGAREE AERINARIEL IDGARLAELL VRYRVGVQAV QTVELLRLDE DFFDGL
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