Gene TBFG_12543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12543 
Symbol 
ID5223225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2851447 
End bp2852859 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content69% 
IMG OID640607305 
Producthypothetical protein 
Protein accessionYP_001288472 
Protein GI148823718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones255 
Plasmid unclonability p-value0.0008278 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones172 
Fosmid unclonability p-value0.00719011 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGCGA GCAGACGCAG AATCGCATCG AAATCCGGAT TTTCATGCGA CTCTGCGTCT 
GCTCGCGAGC TGGTTGAGCG CGTCCGTGAG GTGTTGCCGT CGGTGCGGTG TGATCTCGAG
GAGCTGGTCC GCATCGAATC GGTGTGGGCC GACCCAGATC GGCGCGACGA GGTTCACCGC
AGCGCGCGTG CGGTGGCAGA CCTGTTGTCG CAGGCCGGTT TTGACGACGT GCGGATTGTC
AGCGAGCGCG GTGCGCCGGC GGTGATCGCG CGGTACCCGG CGCCGCCGGG GGCGCCGACG
GTGCTGCTCT ATGCCCACCA CGACGTCCAG CCCGAGGGTG ACCGCGGGCA ATGGGTGTCG
CCGCCGTTCG AGCCGACCGA GCGTGGTGGG CGGCTCTACG GGCGGGGCAC CGCCGATGAC
AAGGCAGGTA TCGCCACGCA TGTGGCCGCA TTCTGGGCAC ACGGCGGCAG ACCGCCGGTG
GGCGTCACGG TCTTTGTCGA GGGTGAAGAA GAATCCGGGT CGCCGTCACT GGGCCGGTTG
CTCGCCGCCC ACCGTGACGC GCTGGCAGCC GACGTGATCG TCATCGCCGA CTCGGACAAT
TGGAGCACCG ACATCCCGGC TTTGACGGTG TCGCTACGCG GAATGGCCGA CTGCGTCGTC
GAGGTCGCCA CCCTCGACCA CGGGCTGCAC TCCGGGTTGT GGGGCGGCGT CGTTCCCGAC
GCGCTGACCG TGCTAGTGCG GCTGTTGGCC AGCCTGCACG ACGACGACGG CAACGTGGCC
GTGGCGGGCA TGCACGAAAG CACCGCGGCG CGTGTGGATT ACCCGGCTGG ACGGGTACGC
GCTGAGTCGG GTCTACTGGA CGGAGTATCG GAAATCGGCA CGGGCTCGGT GCCGCAGCGG
CTCTGGGCGA AGCCGGCGAT CACCGTAATC GGCATCGACA CCACATCCGT TGCGGCAGCG
TCCAATACGC TGATCCCGCG GGCCCGGGCC AAGATCAGTA TTCGGGTGGC GCCTGGAGGC
GATGCCACGG CGCACCTGGA CGCGGTGGAG GCCCATCTGC GGCGGCACGC CCCCTGGGGC
GCCCAGGTCA CTGTCACGCG CGGCGAGGTC GGACAGCCCT ACGCCATCGA GGCGAGCGGC
CCTGTCTATG ATGCGGCGCG GTCGGCGTTT CGGCAGGCGT GGGGTGCCGA TCCGATCGAT
ATGGGAATGG GCGGGTCGAT CCCGTTCATC GCCGAGTTCG CCGCCGCGTT CCCGCAGGCG
ACCATCCTTG TCACCGGGGT AGAAGACCCC GGAACGCAGG CGCACAGTGT CAATGAAAGC
CTGCATCTGG GTGTGCTGGA ACGCGCGGCG ACCGCCGAAG CGCTGCTGCT GGCCAAGCTC
GCGGCTATAC CGACAGGTCG CGCCGAAGCT TAG
 
Protein sequence
MSASRRRIAS KSGFSCDSAS ARELVERVRE VLPSVRCDLE ELVRIESVWA DPDRRDEVHR 
SARAVADLLS QAGFDDVRIV SERGAPAVIA RYPAPPGAPT VLLYAHHDVQ PEGDRGQWVS
PPFEPTERGG RLYGRGTADD KAGIATHVAA FWAHGGRPPV GVTVFVEGEE ESGSPSLGRL
LAAHRDALAA DVIVIADSDN WSTDIPALTV SLRGMADCVV EVATLDHGLH SGLWGGVVPD
ALTVLVRLLA SLHDDDGNVA VAGMHESTAA RVDYPAGRVR AESGLLDGVS EIGTGSVPQR
LWAKPAITVI GIDTTSVAAA SNTLIPRARA KISIRVAPGG DATAHLDAVE AHLRRHAPWG
AQVTVTRGEV GQPYAIEASG PVYDAARSAF RQAWGADPID MGMGGSIPFI AEFAAAFPQA
TILVTGVEDP GTQAHSVNES LHLGVLERAA TAEALLLAKL AAIPTGRAEA