Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12543 |
Symbol | |
ID | 5223225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2851447 |
End bp | 2852859 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640607305 |
Product | hypothetical protein |
Protein accession | YP_001288472 |
Protein GI | 148823718 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 255 |
Plasmid unclonability p-value | 0.0008278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 172 |
Fosmid unclonability p-value | 0.00719011 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGCGCGA GCAGACGCAG AATCGCATCG AAATCCGGAT TTTCATGCGA CTCTGCGTCT GCTCGCGAGC TGGTTGAGCG CGTCCGTGAG GTGTTGCCGT CGGTGCGGTG TGATCTCGAG GAGCTGGTCC GCATCGAATC GGTGTGGGCC GACCCAGATC GGCGCGACGA GGTTCACCGC AGCGCGCGTG CGGTGGCAGA CCTGTTGTCG CAGGCCGGTT TTGACGACGT GCGGATTGTC AGCGAGCGCG GTGCGCCGGC GGTGATCGCG CGGTACCCGG CGCCGCCGGG GGCGCCGACG GTGCTGCTCT ATGCCCACCA CGACGTCCAG CCCGAGGGTG ACCGCGGGCA ATGGGTGTCG CCGCCGTTCG AGCCGACCGA GCGTGGTGGG CGGCTCTACG GGCGGGGCAC CGCCGATGAC AAGGCAGGTA TCGCCACGCA TGTGGCCGCA TTCTGGGCAC ACGGCGGCAG ACCGCCGGTG GGCGTCACGG TCTTTGTCGA GGGTGAAGAA GAATCCGGGT CGCCGTCACT GGGCCGGTTG CTCGCCGCCC ACCGTGACGC GCTGGCAGCC GACGTGATCG TCATCGCCGA CTCGGACAAT TGGAGCACCG ACATCCCGGC TTTGACGGTG TCGCTACGCG GAATGGCCGA CTGCGTCGTC GAGGTCGCCA CCCTCGACCA CGGGCTGCAC TCCGGGTTGT GGGGCGGCGT CGTTCCCGAC GCGCTGACCG TGCTAGTGCG GCTGTTGGCC AGCCTGCACG ACGACGACGG CAACGTGGCC GTGGCGGGCA TGCACGAAAG CACCGCGGCG CGTGTGGATT ACCCGGCTGG ACGGGTACGC GCTGAGTCGG GTCTACTGGA CGGAGTATCG GAAATCGGCA CGGGCTCGGT GCCGCAGCGG CTCTGGGCGA AGCCGGCGAT CACCGTAATC GGCATCGACA CCACATCCGT TGCGGCAGCG TCCAATACGC TGATCCCGCG GGCCCGGGCC AAGATCAGTA TTCGGGTGGC GCCTGGAGGC GATGCCACGG CGCACCTGGA CGCGGTGGAG GCCCATCTGC GGCGGCACGC CCCCTGGGGC GCCCAGGTCA CTGTCACGCG CGGCGAGGTC GGACAGCCCT ACGCCATCGA GGCGAGCGGC CCTGTCTATG ATGCGGCGCG GTCGGCGTTT CGGCAGGCGT GGGGTGCCGA TCCGATCGAT ATGGGAATGG GCGGGTCGAT CCCGTTCATC GCCGAGTTCG CCGCCGCGTT CCCGCAGGCG ACCATCCTTG TCACCGGGGT AGAAGACCCC GGAACGCAGG CGCACAGTGT CAATGAAAGC CTGCATCTGG GTGTGCTGGA ACGCGCGGCG ACCGCCGAAG CGCTGCTGCT GGCCAAGCTC GCGGCTATAC CGACAGGTCG CGCCGAAGCT TAG
|
Protein sequence | MSASRRRIAS KSGFSCDSAS ARELVERVRE VLPSVRCDLE ELVRIESVWA DPDRRDEVHR SARAVADLLS QAGFDDVRIV SERGAPAVIA RYPAPPGAPT VLLYAHHDVQ PEGDRGQWVS PPFEPTERGG RLYGRGTADD KAGIATHVAA FWAHGGRPPV GVTVFVEGEE ESGSPSLGRL LAAHRDALAA DVIVIADSDN WSTDIPALTV SLRGMADCVV EVATLDHGLH SGLWGGVVPD ALTVLVRLLA SLHDDDGNVA VAGMHESTAA RVDYPAGRVR AESGLLDGVS EIGTGSVPQR LWAKPAITVI GIDTTSVAAA SNTLIPRARA KISIRVAPGG DATAHLDAVE AHLRRHAPWG AQVTVTRGEV GQPYAIEASG PVYDAARSAF RQAWGADPID MGMGGSIPFI AEFAAAFPQA TILVTGVEDP GTQAHSVNES LHLGVLERAA TAEALLLAKL AAIPTGRAEA
|
| |