Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12135 |
Symbol | |
ID | 5222810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 2376276 |
End bp | 2379317 |
Gene Length | 3042 bp |
Protein Length | 1013 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640606890 |
Product | helicase helZ |
Protein accession | YP_001288068 |
Protein GI | 148823314 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 136 |
Plasmid unclonability p-value | 0.013502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 208 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTT TGCACGGCTT CTGGTCCAAC TCCGGCGGGA TGCGGCTGTG GGCGGAGGAC TCCGATCTGC TGGTGAAGAG CCCGAGTCAG GCGCTGCGCT CCGCGCGGCC ACACCCGTTC GCGGCGCCCG CTGACCTGAT CGCCGGCATA CATCCGGGCA AACCCGCAAC CGCCGTTTTG CTGTTGCCGT CGTTGCGATC GGCGCCGCTG GACTCGCCGG AGCTGATCCG GCTCGCCCCG CGCCCGGCCG CGCGAACCGA TCCGATGCTG TTGGCGTGGA CGGTACCGGT GGTGGACCTG GACCCCACCG CGGCGTTGGC CGCCTTCGAC CAGCCCGCCC CCGACGTCCG CTACGGCGCG TCCGTCGACT ACCTGGCCGA GCTGGCCGTT TTCGCGCGCG AGTTGGTCGA GCGTGGTCGC GTGCTGCCCC AGCTGCGCCG CGACACCCAC GGCGCGGCCG CCTGCTGGCG TCCGGTGTTG CAGGGACGCG ACGTGGTCGC GATGACCTCG CTGGTCTCGG CGATGCCGCC GGTCTGCCGC GCCGAAGTTG GTGGGCACGA CCCGCACGAA CTGGCAACCT CGGCTCTGGA CGCGATGGTC GACGCCGCCG TGCGCGCGGC GCTGTCACCG ATGGACCTGC TGCCCCCGCG ACGGGGTCGC TCCAAACGGC ATCGGGCCGT GGAGGCTTGG CTGACCGCGT TGACCTGCCC GGACGGCCGG TTCGACGCGG AGCCCGACGA ACTCGACGCG CTGGCCGAGG CGTTGCGGCC ATGGGACGAC GTCGGTATCG GCACCGTCGG CCCGGCGCGG GCGACGTTTC GGCTGTCCGA AGTCGAGACC GAAAACGAGG AGACGCCCGC GGGCTCGTTG TGGAGGCTGG AGTTCTTATT GCAGTCGACG CAGGACCCCA GCCTGCTGGT CCCCGCCGAG CAGGCATGGA ACGACGACGG CAGCCTGCGC CGCTGGCTGG ACCGGCCGCA GGAGCTGCTG CTGACCGAAC TGGGCCGGGC CTCTCGGATT TTCCCCGAGC TCGTCCCGGC GCTGCGCACC GCGTGCCCGT CCGGGCTTGA GCTCGACGCC GACGGCGCCT ACCGATTCCT GTCGGGTACG GCCGCGGTGC TCGACGAGGC TGGGTTTGGC GTGCTGCTGC CGTCCTGGTG GGACCGCCGC CGCAAGCTGG GCTTGGTCCT GTCCGCATAT ACCCCGGTCG ACGGCGTGGT GGGCAAGGCC AGCAAGTTCG GCCGCGAGCA GCTCGTCGAG TTCCGCTGGG AGCTGGCCGT GGGCGACGAT CCGCTCAGCG AGGAGGAGAT CGCGGCGCTG ACCGAAACCA AGTCCCCGCT GATCCGGCTG CGTGGCCAGT GGGTGGCGCT CGATACCGAA CAGCTGCGCC GCGGGCTGGA GTTTTTGGAG CGTAAGCCAA CCGGCCGCAA GACCACCGCC GAGATCCTCG CGCTGGCCGC CAGCCACCCC GACGACGTGG ACACCCCGCT CGAGGTCACC GCCGTACGCG CCGACGGCTG GCTCGGGGAC CTGCTCGCCG GGGCCGCCGC GGCGTCGCTG CAGCCGTTGG ACCCGCCCGA CGGATTCACC GCGACGCTGC GTCCCTACCA GCAGCGCGGT CTGGCGTGGC TGGCGTTTTT GTCCTCGCTC GGTTTGGGCA GCTGCCTGGC CGACGACATG GGCCTGGGCA AGACGGTGCA GCTATTGGCC CTGGAAACCT TGGAATCCGT TCAGCGCCAC CAGGATCGCG GCGTCGGACC CACACTGCTA CTGTGCCCGA TGTCGTTGGT GGGCAACTGG CAGCAGGAAG CGGCCAGGTT TGCACCCAAC CTGCGGGTGT ACGCCCACCA CGGGGGCGCC CGGCTGCACG GCGAGGCGTT GCGCGACCAC CTCGAGCGCA CCGACCTGGT CGTGAGCACC TATACCACCG CCACCCGCGA CATCGACGAG CTGGCGGAAT ACGAATGGAA CCGGGTGGTG CTGGACGAGG CCCAGGCGGT GAAGAACAGC CTGTCCCGGG CGGCCAAGGC GGTGCGACGG CTACGCGCGG CGCACCGGGT CGCGCTGACC GGGACACCGA TGGAGAACCG GCTCGCCGAG CTGTGGTCGA TCATGGACTT CCTCAACCCG GGCCTGCTCG GATCCTCCGA ACGCTTCCGC ACCCGCTACG CGATCCCGAT CGAGCGGCAC GGGCACACCG AACCGGCCGA ACGGCTGCGC GCATCGACGC GGCCCTACAT CCTGCGCCGG CTCAAGACCG ACCCGGCGAT CATCGACGAT CTGCCGGAGA AGATCGAGAT CAAGCAGTAC TGCCAACTCA CCACCGAGCA GGCGTCGCTG TATCAGGCCG TCGTCGCCGA CATGATGGAA AAGATCGAAA ACACCGAAGG GATCGAGCGG CGCGGCAACG TGCTGGCCGC GATGGCCAAG CTCAAACAGG TGTGCAACCA CCCCGCCCAG CTGCTGCACG ATCGCTCCCC GGTCGGTCGG CGGTCCGGGA AGGTGATCCG GCTCGAGGAG ATCCTGGAAG AGATCCTGGC CGAGGGCGAC CGGGTGCTGT GTTTTACCCA GTTCACCGAG TTCGCCGAGC TGCTGGTGCC GCACCTGGCC GCACGCTTCG GCCGTGCCGC CCGAGACATT GCCTACCTGC ACGGTGGCAC CCCGAGGAAG CGGCGTGACG AGATGGTGGC CCGGTTCCAG TCCGGTGACG GCCCGCCCAT TTTTCTGCTG TCGTTGAAGG CGGGCGGTAC CGGGCTGAAC CTCACCGCCG CCAATCATGT TGTGCACCTG GACCGCTGGT GGAACCCGGC GGTCGAGAAC CAGGCGACGG ACCGGGCGTT TCGGATCGGG CAGCGGCGCA CGGTGCAGGT CCGCAAGTTC ATCTGCACCG GCACCCTCGA GGAGAAGATC GACGAAATGA TCGAGGAGAA AAAGGCGCTG GCCGACTTGG TGGTCACCGA CGGCGAAGGC TGGCTGACCG AACTGTCCAC CCGCGATCTG CGCGAGGTGT TCGCGCTGTC CGAAGGCGCC GTCGGTGAGT AG
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Protein sequence | MLVLHGFWSN SGGMRLWAED SDLLVKSPSQ ALRSARPHPF AAPADLIAGI HPGKPATAVL LLPSLRSAPL DSPELIRLAP RPAARTDPML LAWTVPVVDL DPTAALAAFD QPAPDVRYGA SVDYLAELAV FARELVERGR VLPQLRRDTH GAAACWRPVL QGRDVVAMTS LVSAMPPVCR AEVGGHDPHE LATSALDAMV DAAVRAALSP MDLLPPRRGR SKRHRAVEAW LTALTCPDGR FDAEPDELDA LAEALRPWDD VGIGTVGPAR ATFRLSEVET ENEETPAGSL WRLEFLLQST QDPSLLVPAE QAWNDDGSLR RWLDRPQELL LTELGRASRI FPELVPALRT ACPSGLELDA DGAYRFLSGT AAVLDEAGFG VLLPSWWDRR RKLGLVLSAY TPVDGVVGKA SKFGREQLVE FRWELAVGDD PLSEEEIAAL TETKSPLIRL RGQWVALDTE QLRRGLEFLE RKPTGRKTTA EILALAASHP DDVDTPLEVT AVRADGWLGD LLAGAAAASL QPLDPPDGFT ATLRPYQQRG LAWLAFLSSL GLGSCLADDM GLGKTVQLLA LETLESVQRH QDRGVGPTLL LCPMSLVGNW QQEAARFAPN LRVYAHHGGA RLHGEALRDH LERTDLVVST YTTATRDIDE LAEYEWNRVV LDEAQAVKNS LSRAAKAVRR LRAAHRVALT GTPMENRLAE LWSIMDFLNP GLLGSSERFR TRYAIPIERH GHTEPAERLR ASTRPYILRR LKTDPAIIDD LPEKIEIKQY CQLTTEQASL YQAVVADMME KIENTEGIER RGNVLAAMAK LKQVCNHPAQ LLHDRSPVGR RSGKVIRLEE ILEEILAEGD RVLCFTQFTE FAELLVPHLA ARFGRAARDI AYLHGGTPRK RRDEMVARFQ SGDGPPIFLL SLKAGGTGLN LTAANHVVHL DRWWNPAVEN QATDRAFRIG QRRTVQVRKF ICTGTLEEKI DEMIEEKKAL ADLVVTDGEG WLTELSTRDL REVFALSEGA VGE
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