Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11928 |
Symbol | |
ID | 5222605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2153430 |
End bp | 2154506 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640606685 |
Product | lipoprotein lppD |
Protein accession | YP_001287865 |
Protein GI | 148823111 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 301 |
Plasmid unclonability p-value | 0.0395522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 221 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGG CTGCCGGGTT GCCCCGGTTG TCCTGGTTTG CCGGGCTGAC CTGGTTCGCC GGGGGTTCCA CCGGGGCCGG GTGCGCCGCC CACCCCGCCC TGGCCGGGTT GACCGCCGGG GCCCGCTGCC CCGCCTATGC CGCCATCTCC GCCTCTACCG CCCGCCCCGC CGCGACCGCC TTGCCCGCCG TCGCCGCCTC TACCGCCCGC CCCGCCGCGA CCGCCGGCAC CACCCCGGCC ACCGGCGCCT CCGGCTCCGC CCGGCCCACC GACGCCGCGG GCATGGCTGA CCTCGCCCGG CCCGGCGTCG TCGCCACTCA TGCTGTTCGC ACCCTCGGTA CAACTGGATC ACGAGCCATC GGTCTGTGTC CTTGCCAGCC GCTTGATTGT CCTCGTTCAC CTCAAGCTAC CCTGAATCTG GGCTCGATGG GCCGGAGTCT CGATGGGCCG CAGTGGCGCC GGGCGAGGGT TCGATTGTGT GGGCGATGGT GGCGACGGTC CAACACAACA AGGGGTGCAT CACCGCGGCC GCCGAGTACT TGCAGGGGGG ACAATGTGTC GATGATCGAG TTGGAGGTAC ATCAGGCCGA CGTGACCAAG CTCGAGCTCG ACGCCATCAC CAATGCGGCG AACACCCGAC TGCGGCATGC CGGTGGTGTC GCTGCGGCCA TCGCCCGCGC CGGCGGCCCC GAGCTGCAGC GCGAGTCCAC CGAGAAGGCG CCGATTGGGC TTGGGGAAGC GGTCGAGACC ACGGCCGGTG ACATGCCGGC GCGCTACGTG ATCCACGCGG CGACGATGGA GCTAGGAGGT CCGACCTCGG GCGAGATCAT CACCGCAGCC ACCGCTGCTA CCCTGCGGAA AGCCGACGAG CTCGGTTGCC GCTCGCTGGC GCTGGTGGCT TTCGGCACGG GCGTGGGCGG CTTTCCGCTC GACGACGCTG CGCGGCTGAT GGTCGGCGCC GTCCGTCGGC ACCGGCCGGG GTCGCTGCAA AGGGTGGTAT TTGCGGTCCA TGGGGATGCG GCCGAGCGGG CGTTTAGCGC TGCTATTCAG GCCGGAGAAG ATACCGCTCG ACGGTAG
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Protein sequence | MSRAAGLPRL SWFAGLTWFA GGSTGAGCAA HPALAGLTAG ARCPAYAAIS ASTARPAATA LPAVAASTAR PAATAGTTPA TGASGSARPT DAAGMADLAR PGVVATHAVR TLGTTGSRAI GLCPCQPLDC PRSPQATLNL GSMGRSLDGP QWRRARVRLC GRWWRRSNTT RGASPRPPST CRGDNVSMIE LEVHQADVTK LELDAITNAA NTRLRHAGGV AAAIARAGGP ELQRESTEKA PIGLGEAVET TAGDMPARYV IHAATMELGG PTSGEIITAA TAATLRKADE LGCRSLALVA FGTGVGGFPL DDAARLMVGA VRRHRPGSLQ RVVFAVHGDA AERAFSAAIQ AGEDTARR
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