Gene TBFG_11260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11260 
Symbol 
ID5221937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1381290 
End bp1382696 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content66% 
IMG OID640606014 
Productlipoprotein (sugar-binding) lpqY 
Protein accessionYP_001287205 
Protein GI148822451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones388 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones169 
Fosmid unclonability p-value0.00432408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTCATGA GTCGCGGGCG GATACCGAGG CTGGGCGCTG CCGTACTGGT GGCGTTGACG 
ACCGCGGCGG CGGCGTGCGG GGCCGATAGC CAGGGGCTGG TGGTCAGCTT CTACACACCG
GCCACCGACG GCGCGACGTT CACCGCAATT GCCCAACGCT GCAACCAACA GTTCGGCGGC
CGGTTCACCA TTGCGCAGGT CAGCTTGCCC AGGTCCCCCA ATGAGCAACG GTTACAGCTG
GCCCGACGGT TGACCGGTAA CGACCGCACC CTGGACGTCA TGGCGCTGGA TGTGGTGTGG
ACGGCGGAGT TCGCCGAAGC GGGGTGGGCG CTGCCGCTGT CGGACGACCC AGCGGGGCTG
GCCGAGAACG ACGCCGTCGC CGATACCCTG CCAGGCCCGC TTGCGACGGC CGGCTGGAAC
CACAAGCTGT ACGCGGCACC CGTCACCACT AATACTCAAT TGCTTTGGTA CCGACCAGAT
TTGGTAAATA GCCCGCCAAC GGATTGGAAT GCCATGATCG CTGAGGCGGC CCGGCTGCAC
GCGGCGGGCG AGCCTAGCTG GATCGCGGTA CAGGCCAATC AGGGCGAGGG CTTAGTGGTG
TGGTTCAACA CGCTGCTGGT GAGCGCTGGT GGATCGGTGC TCTCCGAGGA CGGCCGGCAC
GTCACCTTGA CCGATACTCC CGCACACCGA GCGGCTACGG TCAGCGCGCT ACAGATCCTC
AAATCGGTGG CTACCACGCC CGGCGCCGAC CCCTCGATCA CCCGCACCGA AGAGGGCAGC
GCGCGGTTGG CCTTCGAACA GGGCAAGGCC GCGCTCGAGG TCAATTGGCC GTTCGTGTTT
GCGTCCATGC TCGAGAACGC GGTGAAGGGT GGTGTGCCCT TCTTACCGCT TAACCGGATT
CCGCAGTTGG CCGGCAGCAT CAACGACATC GGGACGTTCA CGCCCAGCGA CGAGCAGTTC
CGCATCGCGT ATGACGCCAG CCAGCAGGTG TTCGGTTTCG CGCCCTATCC GGCTGTAGCG
CCCGGCCAGC CAGCCAAGGT GACGATCGGC GGGTTGAACC TGGCGGTGGC CAAGACGACC
CGCCATCGAG CGGAGGCATT CGAAGCGGTG CGTTGTCTGC GTGACCAGCA CAATCAGAGG
TACGTCTCGC TCGAGGGGGG TCTGCCCGCG GTGCGGGCGT CGCTGTACTC CGATCCGCAA
TTCCAGGCGA AGTATCCGAT GCACGCCATT ATTCGGCAGC AACTCACCGA TGCCGCGGTG
CGGCCGGCGA CGCCGGTGTA CCAGGCGTTG TCCATCCGGC TCGCGGCGGT GCTGAGCCCG
ATCACCGAGA TCGACCCGGA GTCCACGGCC GACGAACTTG CCGCGCAGGC GCAGAAAGCC
ATCGACGGCA TGGGCCTGCT CCCGTGA
 
Protein sequence
MVMSRGRIPR LGAAVLVALT TAAAACGADS QGLVVSFYTP ATDGATFTAI AQRCNQQFGG 
RFTIAQVSLP RSPNEQRLQL ARRLTGNDRT LDVMALDVVW TAEFAEAGWA LPLSDDPAGL
AENDAVADTL PGPLATAGWN HKLYAAPVTT NTQLLWYRPD LVNSPPTDWN AMIAEAARLH
AAGEPSWIAV QANQGEGLVV WFNTLLVSAG GSVLSEDGRH VTLTDTPAHR AATVSALQIL
KSVATTPGAD PSITRTEEGS ARLAFEQGKA ALEVNWPFVF ASMLENAVKG GVPFLPLNRI
PQLAGSINDI GTFTPSDEQF RIAYDASQQV FGFAPYPAVA PGQPAKVTIG GLNLAVAKTT
RHRAEAFEAV RCLRDQHNQR YVSLEGGLPA VRASLYSDPQ FQAKYPMHAI IRQQLTDAAV
RPATPVYQAL SIRLAAVLSP ITEIDPESTA DELAAQAQKA IDGMGLLP