Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11260 |
Symbol | |
ID | 5221937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1381290 |
End bp | 1382696 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640606014 |
Product | lipoprotein (sugar-binding) lpqY |
Protein accession | YP_001287205 |
Protein GI | 148822451 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 388 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 169 |
Fosmid unclonability p-value | 0.00432408 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTCATGA GTCGCGGGCG GATACCGAGG CTGGGCGCTG CCGTACTGGT GGCGTTGACG ACCGCGGCGG CGGCGTGCGG GGCCGATAGC CAGGGGCTGG TGGTCAGCTT CTACACACCG GCCACCGACG GCGCGACGTT CACCGCAATT GCCCAACGCT GCAACCAACA GTTCGGCGGC CGGTTCACCA TTGCGCAGGT CAGCTTGCCC AGGTCCCCCA ATGAGCAACG GTTACAGCTG GCCCGACGGT TGACCGGTAA CGACCGCACC CTGGACGTCA TGGCGCTGGA TGTGGTGTGG ACGGCGGAGT TCGCCGAAGC GGGGTGGGCG CTGCCGCTGT CGGACGACCC AGCGGGGCTG GCCGAGAACG ACGCCGTCGC CGATACCCTG CCAGGCCCGC TTGCGACGGC CGGCTGGAAC CACAAGCTGT ACGCGGCACC CGTCACCACT AATACTCAAT TGCTTTGGTA CCGACCAGAT TTGGTAAATA GCCCGCCAAC GGATTGGAAT GCCATGATCG CTGAGGCGGC CCGGCTGCAC GCGGCGGGCG AGCCTAGCTG GATCGCGGTA CAGGCCAATC AGGGCGAGGG CTTAGTGGTG TGGTTCAACA CGCTGCTGGT GAGCGCTGGT GGATCGGTGC TCTCCGAGGA CGGCCGGCAC GTCACCTTGA CCGATACTCC CGCACACCGA GCGGCTACGG TCAGCGCGCT ACAGATCCTC AAATCGGTGG CTACCACGCC CGGCGCCGAC CCCTCGATCA CCCGCACCGA AGAGGGCAGC GCGCGGTTGG CCTTCGAACA GGGCAAGGCC GCGCTCGAGG TCAATTGGCC GTTCGTGTTT GCGTCCATGC TCGAGAACGC GGTGAAGGGT GGTGTGCCCT TCTTACCGCT TAACCGGATT CCGCAGTTGG CCGGCAGCAT CAACGACATC GGGACGTTCA CGCCCAGCGA CGAGCAGTTC CGCATCGCGT ATGACGCCAG CCAGCAGGTG TTCGGTTTCG CGCCCTATCC GGCTGTAGCG CCCGGCCAGC CAGCCAAGGT GACGATCGGC GGGTTGAACC TGGCGGTGGC CAAGACGACC CGCCATCGAG CGGAGGCATT CGAAGCGGTG CGTTGTCTGC GTGACCAGCA CAATCAGAGG TACGTCTCGC TCGAGGGGGG TCTGCCCGCG GTGCGGGCGT CGCTGTACTC CGATCCGCAA TTCCAGGCGA AGTATCCGAT GCACGCCATT ATTCGGCAGC AACTCACCGA TGCCGCGGTG CGGCCGGCGA CGCCGGTGTA CCAGGCGTTG TCCATCCGGC TCGCGGCGGT GCTGAGCCCG ATCACCGAGA TCGACCCGGA GTCCACGGCC GACGAACTTG CCGCGCAGGC GCAGAAAGCC ATCGACGGCA TGGGCCTGCT CCCGTGA
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Protein sequence | MVMSRGRIPR LGAAVLVALT TAAAACGADS QGLVVSFYTP ATDGATFTAI AQRCNQQFGG RFTIAQVSLP RSPNEQRLQL ARRLTGNDRT LDVMALDVVW TAEFAEAGWA LPLSDDPAGL AENDAVADTL PGPLATAGWN HKLYAAPVTT NTQLLWYRPD LVNSPPTDWN AMIAEAARLH AAGEPSWIAV QANQGEGLVV WFNTLLVSAG GSVLSEDGRH VTLTDTPAHR AATVSALQIL KSVATTPGAD PSITRTEEGS ARLAFEQGKA ALEVNWPFVF ASMLENAVKG GVPFLPLNRI PQLAGSINDI GTFTPSDEQF RIAYDASQQV FGFAPYPAVA PGQPAKVTIG GLNLAVAKTT RHRAEAFEAV RCLRDQHNQR YVSLEGGLPA VRASLYSDPQ FQAKYPMHAI IRQQLTDAAV RPATPVYQAL SIRLAAVLSP ITEIDPESTA DELAAQAQKA IDGMGLLP
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