Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2358 |
Symbol | |
ID | 5205127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2939065 |
End bp | 2939718 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640600621 |
Product | cytochrome c, class I |
Protein accession | YP_001281248 |
Protein GI | 148654155 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC TAACCTATCC CTCATTGCCT AATATGGGCA TGCTAATTAT GACCTCAGCC TTAGCGGTAT TAACAGGCTG CTCGTCACAG TCTGATAAAC AGGCCACCAC CTTAGCCCAG ACCACAGATA GCTTTAGCCA AACGGCTGTC TCCCCTGAAG TTGACCCGTA TGCCAGCCGC AATGACGGGG CTTGGGGCGG CGTATATATG AGCGAAGCTG AGCTGACTGA CTCTAATCGC CATATCGTAG ATGTGAATGC TGTGCCACCC TTTGATAAGG ACCCAAGCTT AGAGAAGTGG AATGAGAAGT TCGGCTTTGA GCATGCTTAT ACCACCACAG ATGGCAAAAA GCTGTATCAC GACTCTTGTG CTGCCTGTCA TATGCATAAA GGTGAAGGCG CCCACGGTGC CGGCTACTAT CCACCGCTGG CCAACAACAG TAAGATGCAG TCTAAGTACT ATGTGCTAGA CATCTTGATT AATGGATTTA GGGGTATGCC CTCATTCCGA GGTATGCTAA ATGATGAGCA GATGGCGGCG GTAACCCAGT ATATTGCTCA AGATTTAAAT GGCTTTGACG TCAAAGTGAC GGCAGAAGAT GCCGCACAGC TGCGTCCTGC TGAGCCGCCC ACGTATGATC CCTCGGATGA ATAA
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Protein sequence | MKHLTYPSLP NMGMLIMTSA LAVLTGCSSQ SDKQATTLAQ TTDSFSQTAV SPEVDPYASR NDGAWGGVYM SEAELTDSNR HIVDVNAVPP FDKDPSLEKW NEKFGFEHAY TTTDGKKLYH DSCAACHMHK GEGAHGAGYY PPLANNSKMQ SKYYVLDILI NGFRGMPSFR GMLNDEQMAA VTQYIAQDLN GFDVKVTAED AAQLRPAEPP TYDPSDE
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