Gene PsycPRwf_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2331 
SymbolthyA 
ID5205646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2899060 
End bp2899920 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content46% 
IMG OID640600594 
Productthymidylate synthase 
Protein accessionYP_001281221 
Protein GI148654128 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.226871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACTT CCAAAAATGA AGCCGCTTAT CTTGATTTAA TTCGCTATGT GCGTGACCAC 
GGTACCGAGA AGGGAGACCG TACAGGTACG GGCACCCGCA GTCATTTTGG CGCTCAGTTG
CGCTTTGATT TAAAAGATGG CTTTCCGCTG TTAACGACCA AAAAAGTGCA CATGAAGTCG
ATTACTTATG AACTGTTTTG GTTTTTAAAA GGCGATACCC ATGTCAAATA TTTGCAAGAC
CATGGGGTAC GTATTTGGAA CGAATGGTCA ACTGCGGAGC AAACCGCTCG CTTTGGTCGC
CCTGAGGGTG AGCTGGGTCC TATCTATGGT CATCAGTGGC GTAATTATGG GGCCACTAAA
GCGGAGGACG GCCGCTACAA TCAAGATGGG GTGGACCAAG TTGTTGAGGT AATTGAGCAA
ATTAAGAGCA ACCCCAATTC GCGTCGTTTG ATTGTGTCCG GTTGGAACCC AGCCGAGGCG
ACCCAAGTGG CGCTACCGCC TTGCCATACA TTATTTCAGT TCTTTGTGGC AGACGGCAAA
CTATCTTGCC AGCTGTATCA GCGCTCCGCA GATTTGTTTT TAGGGGTGCC TTTTAACATT
GCCAGCTACT CTTTATTAAC ACATATGATT GCTCAAGTTT GTGACCTAGA GGTGGGTGAG
TTTATTTGGA CAGGTGGTGA TTGTCACTTG TATCAAAACC ATATTGATCA GGTCAATGAA
CAGCTGTCTC GCGAAGCTTA TGAGTTACCT AAATTATGGC TCAACCCTGA AATCAAGGAT
ATTTTTGATT TTACTTTTGA TGATATCCGA GTTGAGGGCT ATCAGTCGCA TCCAGCGATT
AAAGCACCCG TCGCGGTATA A
 
Protein sequence
MITSKNEAAY LDLIRYVRDH GTEKGDRTGT GTRSHFGAQL RFDLKDGFPL LTTKKVHMKS 
ITYELFWFLK GDTHVKYLQD HGVRIWNEWS TAEQTARFGR PEGELGPIYG HQWRNYGATK
AEDGRYNQDG VDQVVEVIEQ IKSNPNSRRL IVSGWNPAEA TQVALPPCHT LFQFFVADGK
LSCQLYQRSA DLFLGVPFNI ASYSLLTHMI AQVCDLEVGE FIWTGGDCHL YQNHIDQVNE
QLSREAYELP KLWLNPEIKD IFDFTFDDIR VEGYQSHPAI KAPVAV