| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2292 |
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| Symbol | |
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| ID | 5205988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2858343 |
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| End bp | 2860574 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600554 |
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| Product | neutral/alkaline nonlysosomal ceramidase |
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| Protein accession | YP_001281182 |
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| Protein GI | 148654089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00401419 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTATTAA CCTCTTTATG CGCCACCTCC GCTTTGTCTT TATCTTTACA GACAATCAAC
TGCCGTAACG ACTCTAACCC CATCTCTTTA GCGAGCTCTG CATCGGCCTT CTATGTTAAA
GATAATGGCT CATTAGAGAA CTCTCAACTA AGCACAAGTG ACCGAGTAGC ACCTATTGCG
GCAAGTACTC ACACTGGCGC TAGTCATCCT CAGCTTAAAC CCAATAAAGC GCCATATTTA
CTCGGTGCAG CTCAAGCTGA TATCACAGGC GCTGCGGCAG AGACAGGTAT GTTCGGTTAT
GCCGCGCAGC AAGTGGCTCA AGGCATCAAT GATAGATTGT ACGCTCATGC CTTTATTATT
GTAGACAATC AGGCAGACAG CGCACAAACT ACTCAAAACA GCGCCCGTAT TGTCTATGTA
TCAGCCGATA TGGGTGCCAT GTTTAATGCG GTCAGACTCG AAGTGTTAAA ACGCTTGCAC
GCCTTGTATG GCCCACTATA CACAGATGCC AACGTCATGC TCACGGCTAC CCATACCCAT
GTGGGCAATG CCGGCTACTC CCATCAAAGA TTGTATCAAA TTGCCAGTAA AGATGACACC
ACTGCCGGCT ATAGCGAACA GAACTTCACT GCCATAGTGG ATGGCATCGT ACGCGCTATT
AGTAAGGCGC ATCAAAACTT AACACCCGGC ACCTTATCAC TAGCGCAAGG CAAGCTCACA
GGCGCGACAC GCAACCGCTC AGCCGCCGCT TATAACAATA ATCCCGATGC CAAAGCCTAT
GACAGTAATG TCAATGACAC CATGACTCAG CTGCGCCTTG ATGATCAAAA TGGCAAGCCT
TTGGGCGCCA TTAACTGGTT TGCCATTCAC CCAACCAGCT TTAGCAATCA GTTTATGTAC
CTAAGTGCTG ATAATAAAGG CTATGCTCAG CAAGGCATGC AAGCGGCCAT TACCAAAAAA
ACAGGCCAGC CCTTTGTGGC CGCCTTTGCC AACGCTGATG AGGGAGATGT GGTGGCCGCA
GGAGGTAATG CCCACTCCTC GGCAGGCTTC GAGGGAGAAG ATGAGGAATG GCATAACGTG
GTTCGTGATG GCTCCTTGCA GCTTAATAAA GCACTTGAGC TATGGGACAA AGCCGAGCCG
GTAGTTGGAC CCATTGACAC ACGAGCCCGC TGGATTGATT TAAATGGCTA TGTGGTGGAT
GCTCAATACA CCCACGGTGC TGGCGAGCAA AGATTATGTG TGCCAGCTCG CGGCTATGCG
TTTGCCGCCG GTGCAGAAAA TGGCCCCTCC GACATACCCG GTATCTATGA AGGTATGACC
AAAGACTCTT TGAGTATCAC TGACAAGATT AACAAGACCG ATACTTCGAT ATTGGGCAGC
GCTACTCGAG CCGCTTTTGG TGTGGTGGGC GCTGTCAGTC AAGATCCGTG TCAGGCCGAA
AAGCCGGTGC TCCTACCTAC CGGTAAATTG GGCTGGGTCA ATAGCAAACA GCCGGTACAA
TTAATGCGCA TTGCCAACCT AGCCTTAGTG GCCATACCCG GAGAGCCAAC CACCATGGTG
GGGCGGCGTT TGCAATCTGC GGTGCTGGAT GAATTAAAAG ACAGCGGCGT CAATACTGTC
ATCGTCAATG GACTGGCCAA TAACTATAGC GGCTATGTTG CGACCCGTGA GGAATATGCA
CTGCAACATT ATGAGGGCGC CTCTACCGAA TATGGCCCAT ATCAAAGTAA TGCCTATGTG
CAAGAGTATG TACAACTGGC TCGGGCACTC AAACACAATC AGCCGCTAAA GAACCATACC
GCGCCACCTT CTATAGCAGC TGGCAAATTC GCTGAGCGAC CCGGCGTCGT ATTTGATGAC
AAACCCTTTA ACCAAGCTTG GGGACAGGTA CTTATGCAGC CCAAGCAGCA TTATCAGAAG
GCCGAGGTGG TTAGTGTGAG CTTCCGCGGT GCCCATCCAA AAAATAACTT ACGCACCGAG
GACACCTTTT TAAAAGTGCA GCGCCTAGTG CAAGGTAAAT GGGTAGACTA CCTGACGGAT
GCAAGCTTTG ATACTCGGTA CAGTTGGGCG CGCGAGGGCA TCACGTATAG CAAAGTTACC
ATTGATTGGC GCATTGATGA AGACACGCCT TCTGGTACTT ACCGTATATT GCATCAAGGA
GATTGGAAAA ACGGATGGGA CGGTAAAATC ACCGCGTATG CGGGTGCGTC TTATGCTTTT
GAAGTGAAAT AA
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| Protein sequence | MLLTSLCATS ALSLSLQTIN CRNDSNPISL ASSASAFYVK DNGSLENSQL STSDRVAPIA
ASTHTGASHP QLKPNKAPYL LGAAQADITG AAAETGMFGY AAQQVAQGIN DRLYAHAFII
VDNQADSAQT TQNSARIVYV SADMGAMFNA VRLEVLKRLH ALYGPLYTDA NVMLTATHTH
VGNAGYSHQR LYQIASKDDT TAGYSEQNFT AIVDGIVRAI SKAHQNLTPG TLSLAQGKLT
GATRNRSAAA YNNNPDAKAY DSNVNDTMTQ LRLDDQNGKP LGAINWFAIH PTSFSNQFMY
LSADNKGYAQ QGMQAAITKK TGQPFVAAFA NADEGDVVAA GGNAHSSAGF EGEDEEWHNV
VRDGSLQLNK ALELWDKAEP VVGPIDTRAR WIDLNGYVVD AQYTHGAGEQ RLCVPARGYA
FAAGAENGPS DIPGIYEGMT KDSLSITDKI NKTDTSILGS ATRAAFGVVG AVSQDPCQAE
KPVLLPTGKL GWVNSKQPVQ LMRIANLALV AIPGEPTTMV GRRLQSAVLD ELKDSGVNTV
IVNGLANNYS GYVATREEYA LQHYEGASTE YGPYQSNAYV QEYVQLARAL KHNQPLKNHT
APPSIAAGKF AERPGVVFDD KPFNQAWGQV LMQPKQHYQK AEVVSVSFRG AHPKNNLRTE
DTFLKVQRLV QGKWVDYLTD ASFDTRYSWA REGITYSKVT IDWRIDEDTP SGTYRILHQG
DWKNGWDGKI TAYAGASYAF EVK
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