Gene PsycPRwf_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2290 
Symbol 
ID5205986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2856611 
End bp2857525 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID640600552 
Productglutamine amidotransferase, class-II 
Protein accessionYP_001281180 
Protein GI148654087 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.006238 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGTCAAT TATTAGGTAT GAACGCCAAT ACCCCAACGG ACATCGGGTT TAGCTTCACA 
GGATTTCACA ACCGAGGCGG AAACACCGAC CACCATAGCG ATGGTTTTGG TATCGCTTTT
TTTGAACCGA GCAAATGTGA TGCACCCAAC CAGTCTGAGG CACAAGGTCG TGGCCGCGGA
CTGCGCCTGT TTCATGATGA TAAGCCAAGC TATGAATCCC CAGTGGCCGA CTTAGTAAAA
AACTATCCCA TCAAAGCACT TAACGTAGTG GCTCACATCC GTAAAGCCAC ACAAGGTAGC
AACTGCTTGG CCAACACCCA CCCTTTCGTG CGTGAAGTGT GGGGCGAGCA ATGGGTATTC
GCTCATAATG GTCAAATGAG TGAAGGCTTT ATTAAGCGCT GCCATCGCCT ACAAGACAAT
GGCAATAGCG AGTACTGCCG GCCAGTTGGC ACAACCGATT CTGAAGTGGC GTTTTGTTAT
TTAATTAATC GTCTAAAATC CACCTATAAA AAACGCCCCT CTGATGAGGA GCTGTTTCGA
TTTTTGACCG CCCAGTGCCG TTATTTGGCA GCCAATGGAT TGTTTAACTG TCTGCTGTCT
AATGGAGATT GGCAATTGGC GTATGCCAAC TCCTTACTGT TTTATCTGAC CCGTAAGGCG
CCCTTTGGTG AAGCCAAGCT GGCTGATGAT GAGTTATCTA TTAACTTTGG GGATGTCACT
ACCGATAAAG ACAAGGTGAG CATTTTGGTC ACTGTGCCGT TGACCGAAAA TGAAGAGTGG
CAGCAACTGG CGGTCAATGA ATGTTTGGTC TTTCAAGACG GCGATATTAT ATTTCGTGAC
ACCCCAAGCC TACGCAAATA CTTAACCATT GAAGAGGGTA TTGCCATTGC CCGTCAAGTG
GGCGCCAGTT TATAA
 
Protein sequence
MCQLLGMNAN TPTDIGFSFT GFHNRGGNTD HHSDGFGIAF FEPSKCDAPN QSEAQGRGRG 
LRLFHDDKPS YESPVADLVK NYPIKALNVV AHIRKATQGS NCLANTHPFV REVWGEQWVF
AHNGQMSEGF IKRCHRLQDN GNSEYCRPVG TTDSEVAFCY LINRLKSTYK KRPSDEELFR
FLTAQCRYLA ANGLFNCLLS NGDWQLAYAN SLLFYLTRKA PFGEAKLADD ELSINFGDVT
TDKDKVSILV TVPLTENEEW QQLAVNECLV FQDGDIIFRD TPSLRKYLTI EEGIAIARQV
GASL