| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2248 |
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| Symbol | |
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| ID | 5204924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2792270 |
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| End bp | 2793310 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600495 |
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| Product | patatin |
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| Protein accession | YP_001281138 |
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| Protein GI | 148654045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000483093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACTA GAGCTGGCTT GCCTTTTAAT GGCCAAAAGA CCGGCTTAGC CTGTGTAGCG
GTCATGGCCT CTACGCTGCT GGTGAGCGCT TGTCACACCT CATCTGTCGC TTCTGGCAAA
TCTGGCCAAC ATGTAGCGAC GTCTACTGCC TCTGCCCCAA CCATCGCTTT GGTATTAGGT
GGCGGGGGCG CTAAGGGATT TGCTCATGTG GGTGTGATTA AAGCTTTGGA GGCCAATAGC
ATTCACCCAA ACTTGGTGGT AGGCACCAGC GTCGGTAGCT TTGTGGGCAG TCTTTATGCC
AGTGGTAAAT CTGCTGCCGA GCTTGAGCGC ATTGCCCGCA CTACTGCAGA CAGCGAGCTG
ACCGACTTTA CCTTAGCTTA TCAAGGTATC ATTGAGGGCA ACAAGCTGCG TGATTTTGTC
AATCTACAGG TCAATAATCA GCCCATTGAA GCCTTTCCCA TTCGCTTTGG CGCAGTGGCG
GCTGAAAAGC ACAGCTTAGC TAAGACCGTA TTTACCCAAG GTGAAGCTGG ACTTGCGGTA
CAGGCCTCAA GTAGCGTCCC TAATGTATTT ATTGCTCCCC GTATTCCTGA TCCTAAGACG
TCAGGTATCG TGGGTAAAAA ATATATCGAC GGCGGGGTGG TCAGTATCGT ACCCGTGGAT
AGCGCCAAAG CACTGGGTGC AGATATTGTA ATTGCGGTGG ATTTACAAAT AAATAAAAAT
AAAAACACCT CTCCATCGGG TATCAAAGAT GCCAACCGCA GTCTGTGGTC ATTAATTGAA
CAAGGCTATA ATAGCTATCT TAATAGCAGT GCTAAAGACT CAGCCACTCA AGCTTACCGT
CAACACTATG CGGCGATTAA TGAGGCAGAA ATAGGCCGTG CTGATGTGGT CATTCGCCCT
GATGTGGCGA ATATCAGTGC CATTACCACC TTAGATCGCG AAAAAGCCAT TGCTGCTGGC
GCTGCTGCCA CCGAGCAAAA CTTGCCAGCC ATCCGCGCAG CGATTGCTAA GGCTCACGTG
CAATATCGGC TCAATAATTG A
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| Protein sequence | MRTRAGLPFN GQKTGLACVA VMASTLLVSA CHTSSVASGK SGQHVATSTA SAPTIALVLG
GGGAKGFAHV GVIKALEANS IHPNLVVGTS VGSFVGSLYA SGKSAAELER IARTTADSEL
TDFTLAYQGI IEGNKLRDFV NLQVNNQPIE AFPIRFGAVA AEKHSLAKTV FTQGEAGLAV
QASSSVPNVF IAPRIPDPKT SGIVGKKYID GGVVSIVPVD SAKALGADIV IAVDLQINKN
KNTSPSGIKD ANRSLWSLIE QGYNSYLNSS AKDSATQAYR QHYAAINEAE IGRADVVIRP
DVANISAITT LDREKAIAAG AAATEQNLPA IRAAIAKAHV QYRLNN
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