Gene PsycPRwf_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2201 
Symbol 
ID5206404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2741764 
End bp2742324 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID640600448 
Productmembrane protein-like protein 
Protein accessionYP_001281091 
Protein GI148653998 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGT CAAAGTGGTT TTCGATAGAC TTAACACAAG TGCTAGGTAT TGCGCTGTCT 
GCGGTGGGGA TTTATTTTGG TCTGATGCTG TTTACGCGGC TTATGGGGCT ACGCAGCTTT
GCTAAGATAT CTAGCCATGA CTTTGCGATG ACCGTGGGCG TAGGTAGTAT TTTGGCGTCC
ACCGTTTTGT CGAAGTCACC CTCTTTAATG CAAGGCTTAG TCGCGATGGC AATGCTGTTT
GTTTTGCAAG CCTTGGTCTC TATGCTGCGC CGTAATGTTA AACCACTAAA AGATTTGATT
GATAATGAGC CATTGGTACT GGTGGCCCAC GGGGAATACC ACTGGGATAA TATTAAAAGT
GCCAATTTGG CCAAAAGCGA TATTCAAGAA GTGCTGCGCA AAAATGGACT AAAATCTAAG
TCAGAAGTAT TTGCGGTGGT GATGGAAACC ACCGGTGATA TGAGCGTGAT CAAACAAAAT
GATGTCGCCC CAGATCAAGA CTTATTCGAT GATATCAGAG ACTGTGAGGT GCTTTTTACA
CCCTCGGGGT CTCATAACTA A
 
Protein sequence
MDESKWFSID LTQVLGIALS AVGIYFGLML FTRLMGLRSF AKISSHDFAM TVGVGSILAS 
TVLSKSPSLM QGLVAMAMLF VLQALVSMLR RNVKPLKDLI DNEPLVLVAH GEYHWDNIKS
ANLAKSDIQE VLRKNGLKSK SEVFAVVMET TGDMSVIKQN DVAPDQDLFD DIRDCEVLFT
PSGSHN