| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2102 |
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| Symbol | |
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| ID | 5206034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2622981 |
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| End bp | 2625167 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600342 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001280992 |
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| Protein GI | 148653899 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.892588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCT CGCGTAAGTT TGATTCATCT AAAGCGTTAG CCCAAAGGGT CGAAAATCGT
TTTCGGGGCG CTCAATCCCG CTTGCATAAT GCCGTTAAAT CTAAGTCAGC CAAAACAAAT
CCTGCCCTTA ACAGCACGGC CGCCAAACGC AGTAAAGCTG CCAAACGCAG CCCTAGTGGG
CGCACTCGGC TGTTTAATGG CTTGTCACAG CCTTTTTTTG TCAAGCGCAC ATCTAACACT
TCCTCTTATG ATATCGGCCA ACCTTTAAAT GGCACTCAAA ATGACCGATT AAGCCCCACT
AAGACCTCTT ATGCCGTTTT GCCTGCTGCC AATAGCTTGA GTGCCCGCCA GCGCTTTTTA
AGGCTATGTA TTTTATTAAG TCTGGCCAGC ATGGCGACTT TCTCAGTCTC TGCCAATGCC
AGTGTGCTTG ATCCTATCCG CCGAGTGTTC TCGCCCATTA TTAATATTAT TGATAGAAAG
CCACCTTCTG AGCCGCGAGC AGGAAAATTG GTGACCGAAC AGCCCGCTTT AGACCCCAAT
ATCAGCAGTC ATCCCATAGA ACAAGATAGC AATACCCGGC TGTCCTTAAC CAAAGACCGA
CCTAGCCTGC TCAATGTGAT GAATGCCGAG TTTTTGTTAA GTCGCGGCGA GATTGATCAA
GCGTTGGCGC TTTATAAACA AGAGTCATTC AAACAAGATG CCACCAGTGT GTTTGAGCGT
GCGCTTGAGT TGTCTTTGTT ATACGAGACG CCCAGAGAAT CCTTAGATTT TGCACTCAAA
TGGCAGCAGC AAAACCCAGA GCATATTCCT GCTTTATTTT ATGTGGCGCA TCTGGCACTC
AAGGCCAGTG ATTATGAGCT GACCGGAAAA GTACTCTCTG AGATATTAAG TTATGATTCT
CAAGCCGATT TGAGCGAGAT TTTGATCGGT ATTTATCCCA ATAACGAGGC CGATCAGCGC
CGCTTGTTAG AGACCTTGCT GCGATTGCCC AAGCACAACA ACCCCTCACT GCTTGTCATG
CAGGCTGGAC TAATGTCTCA TTTGGGTCAG CCAGATATTG CTTTGGTCAG TGTCAATCGT
GCCTTGAAGT CTCAGCCCAA CAACGCCCCC TTTATTGTGC TAAAAGCCGA TATCCTAAAG
CAGCTAGAAC CTGATCGTAA GGTTTTAAAA TTTGTCAGTA GCGAGCGCAA ACGCTTAAAG
AATAATAAAA CCTTATATCT TTATGAAATA CGCTATCTAC TTGAGCTGGG TCAGACCCAA
GAAGCTTGGG ATTTGTTATT AGTAGCGCAT GATTTATTTC ATGATGAAGA GGTGACTTTG
CTGGCCGCCT TGGTCAGTAT CGATATTGAG GCTTATACCA AGGCCGATGA GCTGCTCTCT
GAGCTGGCCT CCTCCCCCGC TTATATCGAC CAAGCCTATT ATTATTTGGG TATCAGCGCC
GAACGTCAGC ACAAATATGA GCGTGCTGAG CGGTTTTTGT CCAAAGTCAT GCAAGAAAAC
TTAGTGTTAA AAGCACGTCA AAAGCTGGTG TCTATCCAGT TGCTACAGGG TCATGCCGAT
CAAGCATTGG CCACCTTACA GCAGTTTAGC CATCAATTTG ATGTCTATGC GCCCGAAAGT
GCCATCATGC AGGCCGATAT CTTACGTCAG CAAGGTAAAT TGCCTGAAGC GCAGCAGTTG
TTGGCCGACG CCAATGCGCG TGCGCCCGAT GATACCAAGC TGCTTTTTGC CCGCGCACAA
CTGTTAGATA ATGAAAAAGA TACCGCGCTC AAACACGAAC TGCTGGACCA TCTGCTGCTG
ATTAACCCAG AAAACCCGGA TTATATTTTG GCCTTGGCGG TATTGTTATT TGAGCAAGGT
GACGAGACAG AGGTGGCAAA GTCGCTTACT TTGGCACAGT CAATATTAGA GATTCCTTTT
GACTCACCTA TGTTTAAGCA AAACAATTAT TTGGCTGCTT TAAACATCTT AGCCGCTGAT
GCTCTATCAA AACAGCAGTA TCAAGCAGTG GTCGAATATT TAGAGGGGCC TTATGACATC
TCGCCCACCC TAGACTCAGG AATTATTTTG CTGCGCGCTT ATCAAGGCTT AGATGAGCAG
GATAAAGTGC TGAGCTTATT TAATGATATT CAGCAGCGCT TTGCGGTCGG TCAGCAAGAT
TTAAGTGATC GCTTGCAGTC GTATTAG
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| Protein sequence | MLFSRKFDSS KALAQRVENR FRGAQSRLHN AVKSKSAKTN PALNSTAAKR SKAAKRSPSG
RTRLFNGLSQ PFFVKRTSNT SSYDIGQPLN GTQNDRLSPT KTSYAVLPAA NSLSARQRFL
RLCILLSLAS MATFSVSANA SVLDPIRRVF SPIINIIDRK PPSEPRAGKL VTEQPALDPN
ISSHPIEQDS NTRLSLTKDR PSLLNVMNAE FLLSRGEIDQ ALALYKQESF KQDATSVFER
ALELSLLYET PRESLDFALK WQQQNPEHIP ALFYVAHLAL KASDYELTGK VLSEILSYDS
QADLSEILIG IYPNNEADQR RLLETLLRLP KHNNPSLLVM QAGLMSHLGQ PDIALVSVNR
ALKSQPNNAP FIVLKADILK QLEPDRKVLK FVSSERKRLK NNKTLYLYEI RYLLELGQTQ
EAWDLLLVAH DLFHDEEVTL LAALVSIDIE AYTKADELLS ELASSPAYID QAYYYLGISA
ERQHKYERAE RFLSKVMQEN LVLKARQKLV SIQLLQGHAD QALATLQQFS HQFDVYAPES
AIMQADILRQ QGKLPEAQQL LADANARAPD DTKLLFARAQ LLDNEKDTAL KHELLDHLLL
INPENPDYIL ALAVLLFEQG DETEVAKSLT LAQSILEIPF DSPMFKQNNY LAALNILAAD
ALSKQQYQAV VEYLEGPYDI SPTLDSGIIL LRAYQGLDEQ DKVLSLFNDI QQRFAVGQQD
LSDRLQSY
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