| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2101 |
|---|
| Symbol | |
|---|
| ID | 5206033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2621901 |
|---|
| End bp | 2622836 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640600341 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001280991 |
|---|
| Protein GI | 148653898 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATC AGCACCTCAA CTTTGACACT CTCAGCCAAC AGGTCATCTC TACCTTACAA
GCGGATATCG AGACCCTGCT TAATCATGCC AATCTGCCTA GCCCCTTACA TGAGGCCTGC
CACTATGCCA TGACTGGGCA AGGCAAAAAA GTGCGTCCAT TGCTAGTGGC CAGCAGCTAT
CTTACCGTGC TTGCCAGTAG TCAGGCGGCC ACAATCGACA CCTTACCCCT CTTTGATGAC
AACTGTCGCC GTGCCATGTT AGCGGTTGAA TTCTTGCACA CCTACTCACT AATTCATGAT
GATCTGCCTT GTATGGATGA CGATGACTTG CGCCGTGGCC GTCCCACTTG CCATATTAAG
TTTGGTGAGG CGACAGCCCT GCTGGCCGGC GATGTGTTGC AGACCTTGGC TTTTGAAGCT
TTAAGCGCTG ACTTGCCTGG TTTTGCGCCC ATATCCAATG ACAAAGCGGC CAGCTTACTT
ACCCTTTTTG CACCCCGTGC CCGCCGTATG GTGTCAGGTC AGATGCTGGA CTTAAATGCT
GAGAACAAAC AAGTGAGTCA GCCTCAGCTT GAGGCCATTC ACCGCGATAA AACTGGGGCG
TTAATTGAGG CTGCGGTGTT AATGGGCGCC GCCTGCGCTG ATGCCAATGA CACTCAATAC
CAAGCCATTA CTTCATTTGC CAGTAATGTG GGCTTAGCAT TTCAGGTCCA AGACGATATC
TTGGATGTCA CCTCAAGTAC CGATACTTTA GGCAAGCCTA CTGGCAGTGA TGAGGGACTT
AACAAATCGA CTTATGTCAA ATTGATGGGC GTAGAGGCTG CCACCGACTA TGCCAAGTCA
TTATTTTTGG CGGCAACTCA AGCCATCGAT GATAATTTTG ATAAAAATAG CAGCTTAATC
GACTTAGCAC AGTGGTTGTG GCAGCGTCAA AAATAA
|
|---|
| Protein sequence | MTNQHLNFDT LSQQVISTLQ ADIETLLNHA NLPSPLHEAC HYAMTGQGKK VRPLLVASSY
LTVLASSQAA TIDTLPLFDD NCRRAMLAVE FLHTYSLIHD DLPCMDDDDL RRGRPTCHIK
FGEATALLAG DVLQTLAFEA LSADLPGFAP ISNDKAASLL TLFAPRARRM VSGQMLDLNA
ENKQVSQPQL EAIHRDKTGA LIEAAVLMGA ACADANDTQY QAITSFASNV GLAFQVQDDI
LDVTSSTDTL GKPTGSDEGL NKSTYVKLMG VEAATDYAKS LFLAATQAID DNFDKNSSLI
DLAQWLWQRQ K
|
|---|
| |