| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2028 |
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| Symbol | |
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| ID | 5206433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2522900 |
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| End bp | 2525203 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600260 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_001280918 |
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| Protein GI | 148653825 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000881449 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATC AAGTGGCAAC AAAGATGCAA GCACAATGCT TAAAACTTAA AAGCTCAGAC
TCAGAGCCTG GGTATTTAGC AGGTATAAAA CCCGCCAAGC CAATAGGTCA AAAAATCAAA
ACCGCCTCAT TAGCTTTTGG GTTAAGTTTG GCTGGATTAA CCCTGACGGC TGCCTTGCCT
GCGCAGGCGG CAAGCTTGGG GGATTTATTT GGCAGTGCTG AAGTGGAGTC TGGTCAGCAA
AAATTCTTGA AAGTGGAGCA AGCATTTTCG GTAAAGCCCA GTCAAAGCGG CAATAAAATT
ACCATTGCCC TGAACATCAC ACCCAAGCAC TATCTTTATA AAGACAAGCT CGGCTTAAAG
TTACCTGAAG GGGTGAGCGC CAGTGCCATA AAGTTTTCGC ACGTCCCGCA AAGCATAGAT
GACCCCACTT TTGGTAAGGT TCAGGTGTTT AAGCAGCCTC AAGTAACGGC GACGGCGACG
TTGACCAATA CGACTGCTGC GGCTATCAAT GACGATGTCA TAGTTACTTG GCAAGGCTGT
GCTGATGCCG GTCTTTGCTA TCCTCCGCAA AAAGAAATAT TAAGCATAAA TCTGCCGCCG
ACTGTCGCTG CCAAAGCGGC TCCTAAGGTT GACAAAGTAG CCATCGAGCC TGCACAGAGT
AGTAAGGTAC CGGCTACCAC CAAAGCGCAA ATCACACCTC AAGTGGCTCA AGCGGCCGCC
GCTACCTCTG CAGCAGTGGC TGAATCTAGC GCGCCAAATA ATCAAGTCCA AGCTGAAGCC
ACGCCGCCAG ATCAGTTAGC GGGCAGCCAG TCAGAGCCCA GTGAGCTAAA AGATGGCAGC
CTGACGAATA CCGATTTGGT TGCCCCTGCT ACGGATAAGG CTGTAGCTGA AGATGAGAGC
CTGACTTATT CAGCCGCTGC CAGTGCTGAA GGTAGTGCAA ATGCCGATGC AAATACAACT
AATGTGAGTG CCGCATTGGT CGGCGATGGG GTGGTAGATC AAGATCCTTT TGGTCTTAGC
GAACATCCAT GGCTGGCGCT GGGTCTACTA TTTTTGGCAG GCTTAGGTCT GGCATTCACC
CCTTGTGTAC TGCCGATGCT GCCCATTGTC AGTAATATTG TTGCCCGCCA GCACAAGCCC
ACTGCTAAAA AAGGGCTTAT GCTTAGTGGC AGTTACGCTT TAGGTGTGGC GGTTGCTTAT
GGGATTTTGG GTGCAATCAT TGCCATATTT GGTCAACAGC TGGGCATTAT CGGCTGGTTA
CAAAATCCGG TAATCTTATT GGGTTTTGCC GCAGTATTTG TACTACTTGC CTTGTATATG
CTTGATGTCA TAAGCTTTAG CCTACCCAGC GTGTTACGTC AAAAAACCCA AACATTGAGT
CAGTCCGGAG ATAAGTATCT GGGCAGTAGC ACAGGCAGCT TTATTGCAGG CCTGCTGTCT
GCCTTGGTGG TATCGCCCTG TGTATCAGCG CCCTTATTTG GCGCATTGCT CGCGGTCTCT
ACTATCGGCA ATCCACTACT GGGCTTTGCT GCTTTATTTA TGCTGGGCTT TGGTTTGTCT
GCGCCATTAA TGCTGCTGGG CATCAGCCAA GGCAACTTAA TGCCCAAAGC GGGTGAGTGG
ATGAACTGGG TTAAGCAAGG TTTTGCTTTA TTGCTATTTG CAGTGGCTTT GTTGTTGGTT
GAGCGGGTGA TTATCCATCC TGGCATGCTG CTGCTGTGGG CGTTATGGTT TATGGTGGTG
GCAGCCTGGG CTTGGAGCTG GCATGGCCGC GGTGAGCTAT TGACCAAGCC ACTTGCCCTA
TTATTTGGAT TATGGGCAGG TGCAACTTTG GTGGGTGCCG CCGCCGGCAG TAACGATGCT
TGGCAGCCGC TAAAAGTGTT ATCACAAAAG ACGCCTATGC CAGTCATGGC GACAGTGCAG
ACACAGAGCG CCGCTGCAGA TGGTGGGTAT GGGGTACCAG CCGCCGCACA AAGTATTAAA
GATGTGCATA TTAATAGCTT AGATGCATTA ATTCCTTTGG TACAAAATAA TCCTAAGGTC
TTGGTAGATG TCACTGCAGA GTGGTGTATC GAATGCCGCA TTATGGACAA GACTCTGTTT
ACCAACCGTC CAGCTGCCAT GCAACAGTGG CAATTGGTAC GACTGGATGT GACTGAGAGT
AATGCGGAGT CTGCTCGTAT CTTATCGGAG CTTAAGTTGT TTGGTCCGCC AGCACTGCTA
TATTTTGTGG ATGGTAAATT GCAAGTTCAG CAGGTGGGCA CCATAGAGCG TGATGAATTT
GAGCAGACTT TGGCTAAGCT CTAA
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| Protein sequence | MADQVATKMQ AQCLKLKSSD SEPGYLAGIK PAKPIGQKIK TASLAFGLSL AGLTLTAALP
AQAASLGDLF GSAEVESGQQ KFLKVEQAFS VKPSQSGNKI TIALNITPKH YLYKDKLGLK
LPEGVSASAI KFSHVPQSID DPTFGKVQVF KQPQVTATAT LTNTTAAAIN DDVIVTWQGC
ADAGLCYPPQ KEILSINLPP TVAAKAAPKV DKVAIEPAQS SKVPATTKAQ ITPQVAQAAA
ATSAAVAESS APNNQVQAEA TPPDQLAGSQ SEPSELKDGS LTNTDLVAPA TDKAVAEDES
LTYSAAASAE GSANADANTT NVSAALVGDG VVDQDPFGLS EHPWLALGLL FLAGLGLAFT
PCVLPMLPIV SNIVARQHKP TAKKGLMLSG SYALGVAVAY GILGAIIAIF GQQLGIIGWL
QNPVILLGFA AVFVLLALYM LDVISFSLPS VLRQKTQTLS QSGDKYLGSS TGSFIAGLLS
ALVVSPCVSA PLFGALLAVS TIGNPLLGFA ALFMLGFGLS APLMLLGISQ GNLMPKAGEW
MNWVKQGFAL LLFAVALLLV ERVIIHPGML LLWALWFMVV AAWAWSWHGR GELLTKPLAL
LFGLWAGATL VGAAAGSNDA WQPLKVLSQK TPMPVMATVQ TQSAAADGGY GVPAAAQSIK
DVHINSLDAL IPLVQNNPKV LVDVTAEWCI ECRIMDKTLF TNRPAAMQQW QLVRLDVTES
NAESARILSE LKLFGPPALL YFVDGKLQVQ QVGTIERDEF EQTLAKL
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