| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2023 |
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| Symbol | |
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| ID | 5206599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2518596 |
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| End bp | 2519138 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600255 |
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| Product | hypothetical protein |
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| Protein accession | YP_001280913 |
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| Protein GI | 148653820 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGTG GGCCACCAAC GCATATACCC GTATCTAGTC AACAAGGTAT GGCTTTCATT
GAAGTGTTAG TGGCTCTAGT TTTATTTAGT GTGGCAGCGC TCGGTTATGT TGGTTTGCAG
GCACAATCTT TGGCAGCGGT AGATGATGCG GTGATGCGGA CACAAGCTTT GGTTATATTA
ACGGAAGCTG CAGAGCGTAT TCGGACTAAT ATGGGATGGG TGGCACTAAG GACGTATCAA
TTACAGTTTG ATGCAGCCAC TATTCCAGCT ATGACAAGCT GCACTGTAAG AGCGGGCTGT
AATGCGACTC AAGTGGTACA AAACGATGTG GCGGTATTAC GCCTACAAGC CAAACAGCAA
GGTATGACAC TTGCCATGCT CGGTTGTCCT GGCCGGTTGT CCACCACTGA AAACTACTGC
TTAGTCGCTG CATGGCATGG AACACAGGCT GAATATGTCA GCAGCGAGGT CTTAGATGGC
TGCTTACATC TTCAGGGCAA TTATCGAGTA GGGTCGGATT GCTTGTATAT GGAGGCCTAT
TAA
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| Protein sequence | MQSGPPTHIP VSSQQGMAFI EVLVALVLFS VAALGYVGLQ AQSLAAVDDA VMRTQALVIL
TEAAERIRTN MGWVALRTYQ LQFDAATIPA MTSCTVRAGC NATQVVQNDV AVLRLQAKQQ
GMTLAMLGCP GRLSTTENYC LVAAWHGTQA EYVSSEVLDG CLHLQGNYRV GSDCLYMEAY
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