Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2012 |
Symbol | |
ID | 5206683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2505142 |
End bp | 2505990 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640600244 |
Product | PRC-barrel domain-containing protein |
Protein accession | YP_001280902 |
Protein GI | 148653809 |
COG category | [S] Function unknown |
COG ID | [COG3861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02271] conserved domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.621139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.571719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC TAATTCGTTT AAAAGACATC CAATCAACTC ACCGTGATAT TATTGGTGAT GACTACTATG ATCCAACTGG CAAAGCTGCC TATGGTGCTG GTGAAGAAAA AATCGGTAAA ATTGAAGGCG CTTTAGTTGA AGATATCACT GGCCGTATCC GTTATTTAAT CGTAGATGTG GGTGGCTGGT TTAACTCAAA AGAAGTTTTA GTTCCTGCAG GTCTTGCCCG TATTGTTGGT GATGATGTGT TCTTTGACTC TTTAACTAAG TCTCAAGTAG AAGCCATGGA AGAGTATGAC CATGACTATC AGTACAGCTA TAAAGAGCAA GCGAACAAAG ACCGCGCCGC CTTTGTTGCT GACACTGTAC CTGCCGCTGA GCGTGTAGAT ATCAAAGAAG ATTACTACAA TGCACCAAAC ACTTTAGAGC TATTAGAAGA GCGTCTAACA GTTAACAAAG ATCGCATCGT AGCTGGCTTG GTAAAAGTAG GCAAACATGT GGTTACAGAG AACCGTGCTG TAGATGTAGA GCTTGAAGAA GAGCATGCCC ATATTGAGCG TACTGAAGTT AACCGTCCTA CCACTCGCCG TATCGGTGAT GATGCCGGTG CTGACTCAGT AGAAGTTGAG CTAGAAGCTG AGCGTGCTAA TGTAAACAAA GAAACTTACG TTACTGAAGA AGTGAACGTA GGCAAAACTA CTGAGCGTCA CACAGAGACT ATCAATGAAA CTATCCAGCG CGAAGAGCTA GATATTGACC GTGATGGTAA CATTGTCGAC CGTGAAGGTA ACATTGTAGA GCGTGATGAC CTAACTGCTG ATGATGTACG CGCTGCTCGT GGCAAATAA
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Protein sequence | MSQLIRLKDI QSTHRDIIGD DYYDPTGKAA YGAGEEKIGK IEGALVEDIT GRIRYLIVDV GGWFNSKEVL VPAGLARIVG DDVFFDSLTK SQVEAMEEYD HDYQYSYKEQ ANKDRAAFVA DTVPAAERVD IKEDYYNAPN TLELLEERLT VNKDRIVAGL VKVGKHVVTE NRAVDVELEE EHAHIERTEV NRPTTRRIGD DAGADSVEVE LEAERANVNK ETYVTEEVNV GKTTERHTET INETIQREEL DIDRDGNIVD REGNIVERDD LTADDVRAAR GK
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