Gene PsycPRwf_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2012 
Symbol 
ID5206683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2505142 
End bp2505990 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content44% 
IMG OID640600244 
ProductPRC-barrel domain-containing protein 
Protein accessionYP_001280902 
Protein GI148653809 
COG category[S] Function unknown 
COG ID[COG3861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02271] conserved domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.621139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.571719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC TAATTCGTTT AAAAGACATC CAATCAACTC ACCGTGATAT TATTGGTGAT 
GACTACTATG ATCCAACTGG CAAAGCTGCC TATGGTGCTG GTGAAGAAAA AATCGGTAAA
ATTGAAGGCG CTTTAGTTGA AGATATCACT GGCCGTATCC GTTATTTAAT CGTAGATGTG
GGTGGCTGGT TTAACTCAAA AGAAGTTTTA GTTCCTGCAG GTCTTGCCCG TATTGTTGGT
GATGATGTGT TCTTTGACTC TTTAACTAAG TCTCAAGTAG AAGCCATGGA AGAGTATGAC
CATGACTATC AGTACAGCTA TAAAGAGCAA GCGAACAAAG ACCGCGCCGC CTTTGTTGCT
GACACTGTAC CTGCCGCTGA GCGTGTAGAT ATCAAAGAAG ATTACTACAA TGCACCAAAC
ACTTTAGAGC TATTAGAAGA GCGTCTAACA GTTAACAAAG ATCGCATCGT AGCTGGCTTG
GTAAAAGTAG GCAAACATGT GGTTACAGAG AACCGTGCTG TAGATGTAGA GCTTGAAGAA
GAGCATGCCC ATATTGAGCG TACTGAAGTT AACCGTCCTA CCACTCGCCG TATCGGTGAT
GATGCCGGTG CTGACTCAGT AGAAGTTGAG CTAGAAGCTG AGCGTGCTAA TGTAAACAAA
GAAACTTACG TTACTGAAGA AGTGAACGTA GGCAAAACTA CTGAGCGTCA CACAGAGACT
ATCAATGAAA CTATCCAGCG CGAAGAGCTA GATATTGACC GTGATGGTAA CATTGTCGAC
CGTGAAGGTA ACATTGTAGA GCGTGATGAC CTAACTGCTG ATGATGTACG CGCTGCTCGT
GGCAAATAA
 
Protein sequence
MSQLIRLKDI QSTHRDIIGD DYYDPTGKAA YGAGEEKIGK IEGALVEDIT GRIRYLIVDV 
GGWFNSKEVL VPAGLARIVG DDVFFDSLTK SQVEAMEEYD HDYQYSYKEQ ANKDRAAFVA
DTVPAAERVD IKEDYYNAPN TLELLEERLT VNKDRIVAGL VKVGKHVVTE NRAVDVELEE
EHAHIERTEV NRPTTRRIGD DAGADSVEVE LEAERANVNK ETYVTEEVNV GKTTERHTET
INETIQREEL DIDRDGNIVD REGNIVERDD LTADDVRAAR GK