Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1896 |
Symbol | |
ID | 5204631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2355798 |
End bp | 2356490 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600127 |
Product | hypothetical protein |
Protein accession | YP_001280786 |
Protein GI | 148653693 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.508634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAT CCTTAAACAC TCAAGCGAAT AGCGCAACGA ACATGAGCTA TAGCACCACC ATAACCAGTA AAGATGTTGA GCATGTGACA CAGGTAGTAG ACAAAGCCTC AATCAAGCAG CGTCTTGTGG CGGTATACTG TGGGTCACGC ATGGGCAATA GCCCAGTTTA TGAAGCAGCG GCTAGAGAGC TGGGTACTGC CTTAGCAAAA AATGACATGG GTTTGGTCTA TGGCGGCGCA AGTATAGGAC TGATGGGCGC TGTGGCTGAT ACCGTCATTG AAGGTGGCTC GCAAGCGGTG GGCGTGATAC CAAGCTTTAT GCTGGATCAT GAGATTGCTC ATAAAGGGCT GACGCGTCTT CATTTGACCG ATACCATGCA CACCCGCAAA GCAATTATGG CAGAGTACGC TGATGCCTTT ATCACCCTGC CAGGAGGGCT TGGCACTCTT GAAGAGATTA TGGAGATTGC CACTTGGCGC CAGTTGTATC AGCACGAAAA ACCTATGATT ATTCTAAACA TCAATGGATT TTATGATCCC CTGATAGCGC ACCTTAATCA CACCACTGAG CAAGGGTTTA TGAAGCAGCA AGACTTAGAA AGACTGGTGG TGTGTAACTA CATTGATGAG GCCATTGATT TGCTCAATCA GTACGTGCAC ATTGATGATC CTGTGGCTAC TCACAAGATC TGA
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Protein sequence | MTQSLNTQAN SATNMSYSTT ITSKDVEHVT QVVDKASIKQ RLVAVYCGSR MGNSPVYEAA ARELGTALAK NDMGLVYGGA SIGLMGAVAD TVIEGGSQAV GVIPSFMLDH EIAHKGLTRL HLTDTMHTRK AIMAEYADAF ITLPGGLGTL EEIMEIATWR QLYQHEKPMI ILNINGFYDP LIAHLNHTTE QGFMKQQDLE RLVVCNYIDE AIDLLNQYVH IDDPVATHKI
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