Gene PsycPRwf_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1896 
Symbol 
ID5204631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2355798 
End bp2356490 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID640600127 
Producthypothetical protein 
Protein accessionYP_001280786 
Protein GI148653693 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.508634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAT CCTTAAACAC TCAAGCGAAT AGCGCAACGA ACATGAGCTA TAGCACCACC 
ATAACCAGTA AAGATGTTGA GCATGTGACA CAGGTAGTAG ACAAAGCCTC AATCAAGCAG
CGTCTTGTGG CGGTATACTG TGGGTCACGC ATGGGCAATA GCCCAGTTTA TGAAGCAGCG
GCTAGAGAGC TGGGTACTGC CTTAGCAAAA AATGACATGG GTTTGGTCTA TGGCGGCGCA
AGTATAGGAC TGATGGGCGC TGTGGCTGAT ACCGTCATTG AAGGTGGCTC GCAAGCGGTG
GGCGTGATAC CAAGCTTTAT GCTGGATCAT GAGATTGCTC ATAAAGGGCT GACGCGTCTT
CATTTGACCG ATACCATGCA CACCCGCAAA GCAATTATGG CAGAGTACGC TGATGCCTTT
ATCACCCTGC CAGGAGGGCT TGGCACTCTT GAAGAGATTA TGGAGATTGC CACTTGGCGC
CAGTTGTATC AGCACGAAAA ACCTATGATT ATTCTAAACA TCAATGGATT TTATGATCCC
CTGATAGCGC ACCTTAATCA CACCACTGAG CAAGGGTTTA TGAAGCAGCA AGACTTAGAA
AGACTGGTGG TGTGTAACTA CATTGATGAG GCCATTGATT TGCTCAATCA GTACGTGCAC
ATTGATGATC CTGTGGCTAC TCACAAGATC TGA
 
Protein sequence
MTQSLNTQAN SATNMSYSTT ITSKDVEHVT QVVDKASIKQ RLVAVYCGSR MGNSPVYEAA 
ARELGTALAK NDMGLVYGGA SIGLMGAVAD TVIEGGSQAV GVIPSFMLDH EIAHKGLTRL
HLTDTMHTRK AIMAEYADAF ITLPGGLGTL EEIMEIATWR QLYQHEKPMI ILNINGFYDP
LIAHLNHTTE QGFMKQQDLE RLVVCNYIDE AIDLLNQYVH IDDPVATHKI