| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1816 |
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| Symbol | |
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| ID | 5205882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2253611 |
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| End bp | 2254627 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640600045 |
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| Product | fimbrial protein-like protein |
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| Protein accession | YP_001280706 |
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| Protein GI | 148653613 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0146115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGTA AGAGCTACTT CTTGGCAGCG GCTGTACTTG TGGGCTGTAG CCTTGGTGCA
ACCCAAGCGC AGGCAGGCTG TTCTTTAAGC TATGGCTTTA CTACGGTAAA TATTAATATG
GCCATTGGTA AGGTAGTGGC TAAGCCGAAC GACCCAGTGG GTAAAGTTTT ATACACTCGG
CGCGTTAATA TACCTGCTAA TCCTAACTCT CAAATGGTTT GTGACTTTTG GAGTGGGGGC
ACAGTACAGG CAGTTATCTT AAATAATCAG GGGCTTGCAA TGCAGCCTAG TATATATAAG
ACTAACGTAC CAGGTATTGG TATTCGCTTG TATCGAGAGT TGATAGGTGG AGATGGTTTT
TCGGGATATT ACCCTTATTC TTCAAGTTTA AATAGGAATA CAAGATACTC TTTAGGTGAA
GGGTACTTTG TTATTGAAAT TGTTAAGACG GGCGAGGCTA CTGGTACAGG CAGCCTAGCG
CAAGGTCTAT ACAGTAGTTA TTACCTTGAA GGTTATTCCA ATCGTCCCAT TCTAACCAGT
ACTGTTACTG GTGATACTAT TACGATTACC TCTTCTTCTT GTGAGATAAA AAGTAATGCC
AATAAAGTGG TTCAGTTACC CACAATGAAG AATACAGACT TTAAAGGTGT GGGTTCTACC
CAAGGCGAGC AGGCCTTTGA TATCAATATC TTGTGTAATG GGGGTAAAAA CATTCAGACA
CCTGATAAAA TTAGTGTCAG CTTTGACTAT GAAACTGCTA ATAACAACAA TAGTGTTCTA
AAAAATATTG CTCCTACTAA TACACAAGCA AAAGGGGTGG GTACGCAACT GGTATCTAAA
TATAATAAGG CTGATAAAGT TATTGCCAAG GGCGAGCCGC TAAGCCTTGG TACACTTAAT
GCCAGTCAAA CCATAAGCTA TACACTGCCA ATGGTAGCCC GTTATTACCA AACCGATCGT
GTGGTGACTG CAGGTGAGGT GAAGTCGATA GCCACAGTGA CTATTGATTA CGATTAA
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| Protein sequence | MDCKSYFLAA AVLVGCSLGA TQAQAGCSLS YGFTTVNINM AIGKVVAKPN DPVGKVLYTR
RVNIPANPNS QMVCDFWSGG TVQAVILNNQ GLAMQPSIYK TNVPGIGIRL YRELIGGDGF
SGYYPYSSSL NRNTRYSLGE GYFVIEIVKT GEATGTGSLA QGLYSSYYLE GYSNRPILTS
TVTGDTITIT SSSCEIKSNA NKVVQLPTMK NTDFKGVGST QGEQAFDINI LCNGGKNIQT
PDKISVSFDY ETANNNNSVL KNIAPTNTQA KGVGTQLVSK YNKADKVIAK GEPLSLGTLN
ASQTISYTLP MVARYYQTDR VVTAGEVKSI ATVTIDYD
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