| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1780 |
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| Symbol | |
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| ID | 5205706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2205172 |
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| End bp | 2206080 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600005 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001280670 |
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| Protein GI | 148653577 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0290107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAC AGGGTCAAAT TAGTAAAGCC TTTATTGATC AAGCCTCAAA GCTGGTATTT
AACTATGCTT TGCCTTGTTT GCTGTTTTTT AGCGTCATAA AAAGTAAGGT GGACTTTGCT
GAGCAGTTAA ACCTAATTGC GGCAGGTCTG CTGGTGACGT TAGTGTTATT TTTTGGCTCA
GAAATTTATG CTAAGTACTT TATTGAGCGT AATGAAGATA AAGGTGTATT CGTCCAAGGC
GTCTTTCGCA GTAACATGGC CATTATTGGC TTGGCCACAG TGGCCAACGC TTATGGCAAT
GAGGGGCTGA GTATCGGTGC GGTTTATATG GGGGTGATTA CTCTGGTATT TAACGTGCTT
GCAGTGATTA CTTTAACCCG TACCCCAACA GGCGAATCAA AGCCGCAAAC CCGTCAGCGT
GGCTACGCCC TTATGCTGGG TAAAAAAATA GTTACCAATC CATTAATTCT CTCCTTATTG
GCCGCCTTTG CTTACAAAGC TTTGGCTGCC TCTTTAAACC TTCCTCAACT ACCCAATGTG
GTGACTCAGA CCGGCTCACT TCTGGCGGCA TTATCTCTGC CTTTGGCACT GATTTGTGCT
GGTGCCACTA TTGATATGCG CTCTATGCTT GCCTTATCTG GGCTATCTAT GCAGGCCAGT
GTGGGCCGTA TTGTTATCGC ACCTGTCTTA GCGGTATTGG TAGGACTTGC GTTTGGGCTT
ACTGGGGTGC ACTTAGGTGT TTTATTTTTG ATGGTTGCAT CACCGACAGC CGCAGCCAGC
TATGTCATGG CCAAGGCTAT GGGAGGCAAT GAAGTGCTTG CCGCCAATAT CCTAGCTTTT
ACCACTGTCT TCTCCTTGTT TGGGATGGCA ATAGGGGCGG CCATTTTACG TGGGCTTGGG
TGGATGTAA
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| Protein sequence | MYKQGQISKA FIDQASKLVF NYALPCLLFF SVIKSKVDFA EQLNLIAAGL LVTLVLFFGS
EIYAKYFIER NEDKGVFVQG VFRSNMAIIG LATVANAYGN EGLSIGAVYM GVITLVFNVL
AVITLTRTPT GESKPQTRQR GYALMLGKKI VTNPLILSLL AAFAYKALAA SLNLPQLPNV
VTQTGSLLAA LSLPLALICA GATIDMRSML ALSGLSMQAS VGRIVIAPVL AVLVGLAFGL
TGVHLGVLFL MVASPTAAAS YVMAKAMGGN EVLAANILAF TTVFSLFGMA IGAAILRGLG
WM
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