| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1777 |
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| Symbol | |
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| ID | 5206185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2202872 |
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| End bp | 2204020 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640600002 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001280667 |
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| Protein GI | 148653574 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.872149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT
TTAGGATTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAG
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC
TTAGGTTGGA TACCTTTTAA GAAATCTGCC ATCAAGTATC TAAATACAAG ACAAACGGGG
AAGAAAACAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTCG ATAGCTATAA TCTATCTTTG TATCAAATCA TAGACGTATT CGATAGCTAC
AATTTGTCTT TGTATCAAAT CAATACGCTT GAGATAGTGC AAGACAGCCG TCATCGTTGG
TATGCCTGTA TTACTGTTAA AGACCATCCT AGACAAGCAA GTGGCAAAGG CAGCGTTGGT
ATTGACTTAG GCTTAAAGCA GTCTGCTACC ACCTCAAACG GTGACAAGCT GACAACTAAA
CAAACGCAAA AATGGGCGAA TAAATTAGCA GTCGCCCAGC GTGCAAACAA TAAAAGCCGG
GCAAAGGCAA TACACGCCAA AATTAAAAAC TCAAGATTAG ATGCCATACA CAAATTCACC
ACCCAATTAG TTAAGGATAA TGCCTTAATT GTGGTTGGTG ATGTTAAATC ACGCTCATTT
ACCAATTCGA TGACCAACCT AGCTAAATCA ACATACGATG CAGGATGGTT TGAACTCAAA
AGACAACTGG AATATAAATG CAAGTATGCA GGTTGTCAGC TTGAGATAGT GAATGAGAGT
TACACTACCC AGACCTGTTC GCACTGCCTT AAAATAAGTG ATAGTAGTCC AAAAGGTAGA
GCAGGTCTTG GAATAAGAGG ATGGAGGTGT GCTGAGTGTG GCACATGGCA TGATAGAGAT
ATCAATGCTG CTAAGAACAT CCTTGCGGTC GGGCTTGACC GTCTTGTAGA AGGAATCCCC
TCGGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQTG
KKTLKSTIQL SLCKGQKLII DVFDSYNLSL YQIIDVFDSY NLSLYQINTL EIVQDSRHRW
YACITVKDHP RQASGKGSVG IDLGLKQSAT TSNGDKLTTK QTQKWANKLA VAQRANNKSR
AKAIHAKIKN SRLDAIHKFT TQLVKDNALI VVGDVKSRSF TNSMTNLAKS TYDAGWFELK
RQLEYKCKYA GCQLEIVNES YTTQTCSHCL KISDSSPKGR AGLGIRGWRC AECGTWHDRD
INAAKNILAV GLDRLVEGIP SV
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