Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1632 |
Symbol | |
ID | 5205100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2017875 |
End bp | 2018426 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640599854 |
Product | co-chaperone Hsc20 |
Protein accession | YP_001280523 |
Protein GI | 148653430 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0172697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000179444 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCTGATA CTGCCCCTAC TTTTGCCAAC TTCTTCGCTT TATTTGAGCT GCCTGTTGCT TTTGACATCG ATACTAACAA GCTTAGTGAA CGCTTAAGGC AACTACAAAG CCAGTTCCAT CCTGACAAGC TTAGCGCTTT AGATAAAGCC TCATCAGAGC AAAACTCTGC GGTTATCAAC CATGCTTATG ACATCCTGCT ACACCCTGAT AGCCGAGCCA ATTATCTATT AGAGCTGTCC GGTCAAGAGC TTAATACCGA TCATTCTATT GCTGATTTGG ATTTTTTAGA TGACGCGATG GACATGCGTA TGGCCTTAGA TGATGCCGAA GCTAAAACAG ATTTGCTACG TATTGAGCAG CTCAAAGTTA CCGCAGATGA TCGCATTGCT ACCCAATCTC AGCGTTTTAT CCAAGCTTAT GACCATCATG ACTGGCCAAT GGCGATGGAT GCGACTCAAA AGCTTAAGTT TTTGGTCAAG CTAAAAAAAG ATATGGACAC AGCGGTAGAT AACAGCCAGC GTCAGCCAGA TGATGATGAC TTATATCTGT AA
|
Protein sequence | MSDTAPTFAN FFALFELPVA FDIDTNKLSE RLRQLQSQFH PDKLSALDKA SSEQNSAVIN HAYDILLHPD SRANYLLELS GQELNTDHSI ADLDFLDDAM DMRMALDDAE AKTDLLRIEQ LKVTADDRIA TQSQRFIQAY DHHDWPMAMD ATQKLKFLVK LKKDMDTAVD NSQRQPDDDD LYL
|
| |