| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1551 |
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| Symbol | |
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| ID | 5205380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1900380 |
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| End bp | 1901882 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640599769 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001280442 |
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| Protein GI | 148653349 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00504372 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTCCG CAACCCCTGT GCCACCTAGC AAGGAAAAAC TCAATGTCTT ATCCTTCGCT
GGTAAAAATA AAATCCTTCA TTTAGGTTGG ATGGCATTTT TCCTCACTTT TTTCGTATGG
TTTAACCATG CTCCTTTTCT CTCCGTGATT GGAGAGACCT TGGATCTAAC CAAACAACAA
GTTAAAACCT TACTTATTTT AAACGTGGCT TTAACCATTC CAGCACGAGT CATTATAGGA
ATGCTTACTG ATAAGTTTGG GCCCAGAATC GTTTACACCT GCATTTTAGC GCTTGGTGCG
ATACCTTGTT TTACTTTCGC ATTTGCTCAA GACTATACAA CACTTGCCTT ATCGCGCTTT
ATTCTAGGGT TCGTGGGGGC AGGCTTTGTC GTCGGGATTC GTCTCATCAG CGATTGGTTC
CCTGCCAATG AGCTAGGTGC TGCAGAAGGT ATCTATGGCG GCTGGGGTAA CTTTGGTTCT
GCAGCAGCAG CCATGTTATT ACCGACAATA GCCATCGGTT TTGCTGCTTG GTTTGGCGGT
GATGAAGGCT GGCGTTATGC GTGTGCCACA TCTGGCGTCG TCATGGCTTT GTATAGCATA
TTATTTTATA AATTCGTACG CGATACCCCA AAAGGCTCAA CCTATTTCAA ACCAAAAAAA
TCTGGCGCCA TGGCAGTAAC TTCAAAGGGT GACTTCTGGT TAATGATGAT TTTTAAATTG
CCTATGTATT TGGCTCTAGC ACTTCTAGCC TGGAAGCTGT CTCCCGCTGG CGTAAGCTTG
CTTAGCCAAA GCGCAGTAAA CTTTATCTAT ATCGGTCTGG CTTTACTGTA TGTTTATGAG
TTTGTGAGTA GCTATCGCTT TAATAAAGAG GTATTCACCA CCGAAGTATC AGAGTCACAG
CGTTATGATT TTAAACAAGT AGGCGTGTTA AACATTCTTT ATTTTGCAAC CTTTGGTTCA
GAACTGGCAG TGGTGTCTAT GTTGCCCCTT TTCTACTTAG AAACCTTTGA GGTATCTGTG
GTTGCTGCAG GTCTATTGGC GTCATCATAT GCCTTTATGA ACTTAATGTC TCGTCCTGGT
GGTGGTTGGT TAAGTGATAG ATTTGGTCGT AAAAGTACCT TACTTATTTT AACGGCAGGT
CTGGCAGTGG GGTATTTCTT AATGGGTATT GTTGACTCAA CTTGGCCCAT TGCTTTAGCC
CTTTTAATTA CTATGTTCTG CTCATTCTTT GTGCAAGCGG GTGAAGGCGC TGTATTTGCG
GTCATTCCTT TGATCAAACG CAGCATGACA GGGCAGTTTG CGGGTATGAC CGGCGCTTAT
GGTAACGTAG GGTCAGTGGT TTATCTTACT GTACTAAGCC TAGTTTCTTA TCAGACCTTC
TTTATGGTTA TCGCAGTCAC CGCCGTGATT GGATTTTTGG CTTTATTCTT ATTAAAAGAG
CCTTCAGGTG TTATCGTAGA AGAGATGCCA GATGGCACCT TTGCTGAAAT TAGTGTGACC
TAA
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| Protein sequence | MSSATPVPPS KEKLNVLSFA GKNKILHLGW MAFFLTFFVW FNHAPFLSVI GETLDLTKQQ
VKTLLILNVA LTIPARVIIG MLTDKFGPRI VYTCILALGA IPCFTFAFAQ DYTTLALSRF
ILGFVGAGFV VGIRLISDWF PANELGAAEG IYGGWGNFGS AAAAMLLPTI AIGFAAWFGG
DEGWRYACAT SGVVMALYSI LFYKFVRDTP KGSTYFKPKK SGAMAVTSKG DFWLMMIFKL
PMYLALALLA WKLSPAGVSL LSQSAVNFIY IGLALLYVYE FVSSYRFNKE VFTTEVSESQ
RYDFKQVGVL NILYFATFGS ELAVVSMLPL FYLETFEVSV VAAGLLASSY AFMNLMSRPG
GGWLSDRFGR KSTLLILTAG LAVGYFLMGI VDSTWPIALA LLITMFCSFF VQAGEGAVFA
VIPLIKRSMT GQFAGMTGAY GNVGSVVYLT VLSLVSYQTF FMVIAVTAVI GFLALFLLKE
PSGVIVEEMP DGTFAEISVT
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