Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1534 |
Symbol | |
ID | 5205436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1876787 |
End bp | 1877566 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599752 |
Product | regulatory protein, IclR |
Protein accession | YP_001280425 |
Protein GI | 148653332 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGACA ATACCTCTAA GCCCTCTGTT AGCGTACCTG CCATAGATAA AATGTGCCTT ATTTTGGATC TGATTACAGA AGCCAATTAC CCACTTACCT CAGCTGAAAT CGCGTCGCAA TTGTCACTTC CCAAAAGTAG CACCCACAAT ATCTTGCAAA GTCTATTGGC CAAGCATTTG GTGTTTAAAG ACCGTGACAA CCGTTTTCAT TTGGGGTCTT ATCTGTTGTA CTGGGCTGGC AAGTATGAAA AGCAGCACAG TATTATTGAT GTCTTTCACG AGGTCATTGT CAATCACCCC ACGCTATTGC AGCACACGGT GACCTTATCG AAGATTGATG GCAAGGAGGT GGTGTTTTTA GCCTGCCATG AGTCGCCAGC CCCACTAGGT TTTACCTTTC GCTCAGGGGT GCGAGTGCCT GCGCCTTTTT CTGCCACTGG CAAAGCCATG TTATCCACTT ATGACAATAG CACCATAACT CAGCTGTTTG AGCAGCAGAT GCCGGCGCCA TATACCTCAA GAAGTGTGCA GCAATTGGAT GTGCTACTTA AAGAGTTGCA GCAGGTGCGT GATACCGGCA TCTCACTTGA TGATGGTCAG CTGCGAGAGG GTATGTATTG TCTGGGAACC TGTGTGGTCG ATACGGAAGG ACAGCCGATT GCTGGTATGG CCATCAGCTT CGTTAAAGAG GAGTATGAAA AACAGCGCGA GGGCGTCAGC CAAGCCTTAC TGGCCTTGGC CAAAGACATC TCCCAGCGCC TTGGCGTCAG CAGCCACTAA
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Protein sequence | MKDNTSKPSV SVPAIDKMCL ILDLITEANY PLTSAEIASQ LSLPKSSTHN ILQSLLAKHL VFKDRDNRFH LGSYLLYWAG KYEKQHSIID VFHEVIVNHP TLLQHTVTLS KIDGKEVVFL ACHESPAPLG FTFRSGVRVP APFSATGKAM LSTYDNSTIT QLFEQQMPAP YTSRSVQQLD VLLKELQQVR DTGISLDDGQ LREGMYCLGT CVVDTEGQPI AGMAISFVKE EYEKQREGVS QALLALAKDI SQRLGVSSH
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