Gene PsycPRwf_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1534 
Symbol 
ID5205436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1876787 
End bp1877566 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content49% 
IMG OID640599752 
Productregulatory protein, IclR 
Protein accessionYP_001280425 
Protein GI148653332 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGACA ATACCTCTAA GCCCTCTGTT AGCGTACCTG CCATAGATAA AATGTGCCTT 
ATTTTGGATC TGATTACAGA AGCCAATTAC CCACTTACCT CAGCTGAAAT CGCGTCGCAA
TTGTCACTTC CCAAAAGTAG CACCCACAAT ATCTTGCAAA GTCTATTGGC CAAGCATTTG
GTGTTTAAAG ACCGTGACAA CCGTTTTCAT TTGGGGTCTT ATCTGTTGTA CTGGGCTGGC
AAGTATGAAA AGCAGCACAG TATTATTGAT GTCTTTCACG AGGTCATTGT CAATCACCCC
ACGCTATTGC AGCACACGGT GACCTTATCG AAGATTGATG GCAAGGAGGT GGTGTTTTTA
GCCTGCCATG AGTCGCCAGC CCCACTAGGT TTTACCTTTC GCTCAGGGGT GCGAGTGCCT
GCGCCTTTTT CTGCCACTGG CAAAGCCATG TTATCCACTT ATGACAATAG CACCATAACT
CAGCTGTTTG AGCAGCAGAT GCCGGCGCCA TATACCTCAA GAAGTGTGCA GCAATTGGAT
GTGCTACTTA AAGAGTTGCA GCAGGTGCGT GATACCGGCA TCTCACTTGA TGATGGTCAG
CTGCGAGAGG GTATGTATTG TCTGGGAACC TGTGTGGTCG ATACGGAAGG ACAGCCGATT
GCTGGTATGG CCATCAGCTT CGTTAAAGAG GAGTATGAAA AACAGCGCGA GGGCGTCAGC
CAAGCCTTAC TGGCCTTGGC CAAAGACATC TCCCAGCGCC TTGGCGTCAG CAGCCACTAA
 
Protein sequence
MKDNTSKPSV SVPAIDKMCL ILDLITEANY PLTSAEIASQ LSLPKSSTHN ILQSLLAKHL 
VFKDRDNRFH LGSYLLYWAG KYEKQHSIID VFHEVIVNHP TLLQHTVTLS KIDGKEVVFL
ACHESPAPLG FTFRSGVRVP APFSATGKAM LSTYDNSTIT QLFEQQMPAP YTSRSVQQLD
VLLKELQQVR DTGISLDDGQ LREGMYCLGT CVVDTEGQPI AGMAISFVKE EYEKQREGVS
QALLALAKDI SQRLGVSSH