Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1517 |
Symbol | |
ID | 5206269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1852029 |
End bp | 1852820 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599737 |
Product | hypothetical protein |
Protein accession | YP_001280410 |
Protein GI | 148653317 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0547298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA AAACACACCC ATTCAATAAA AAAACGCTAA AAACCAAGCA ACTGACTTTA GCTGCCCTGT GTACCTCTGT TTTGGCCTTG GCGGCTTGTC AGCCGAAAAA TCAGGAAAAC ACCGACTCTA ATGACGCTCA AAGTACGGAA ATGACTGACC ATGAAAAAAT GGGGCATACA GACGCTGATC ATGACAGTGA TGAGCATGAG CTACAGATGC AAGATAGCCA TGAAGGCCAT GATATGAGTA CTGCCGCCAC TACTGAGTTT GGTAAAGAGT ACATGGACGA GATGGATGAC ATGCATGAAG ATATGATGGA AGCATTACAA AGCCATGATG CTGATGTCAC TTTTGCCAAA GGCATGCTTG CTCATCATGA AGGCGCCCTA GATATGGCAG AGATTCAGTT AAAATATGGC AAAGACGACA CCATGCGTAA ATTAGCTCAA GACGTTATGA GCGCCCAACA AGTCGAAATT GATCAAATAA AAGCGTGGCT TAACGCCCAT CCTGACAGCA CAGAACAAGA CTATAATAAA GAGATGCAGC AAGCCTATAG CAGTGGTATG GATGCCGTGC ATGATGAGAT GATGCAAGGC TTACTTGAGG CAGATGCCGA CATGGCATTT GCCAAAGGTA TGCTTGCACA TCACAAAGGT GCGATAGCGA TGGCTGAAAC TCAGCTAAAA TACGGTAAAG ATGAGGCCAT GCGCAAATTG GCTGAAGACA TTATCAGCGC CCAGCAAGCC GAAATTGATC TGATGCAAAA ATGGGTAAGT AAGTCTGCTT AA
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Protein sequence | MTIKTHPFNK KTLKTKQLTL AALCTSVLAL AACQPKNQEN TDSNDAQSTE MTDHEKMGHT DADHDSDEHE LQMQDSHEGH DMSTAATTEF GKEYMDEMDD MHEDMMEALQ SHDADVTFAK GMLAHHEGAL DMAEIQLKYG KDDTMRKLAQ DVMSAQQVEI DQIKAWLNAH PDSTEQDYNK EMQQAYSSGM DAVHDEMMQG LLEADADMAF AKGMLAHHKG AIAMAETQLK YGKDEAMRKL AEDIISAQQA EIDLMQKWVS KSA
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