Gene PsycPRwf_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1517 
Symbol 
ID5206269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1852029 
End bp1852820 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content45% 
IMG OID640599737 
Producthypothetical protein 
Protein accessionYP_001280410 
Protein GI148653317 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0547298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA AAACACACCC ATTCAATAAA AAAACGCTAA AAACCAAGCA ACTGACTTTA 
GCTGCCCTGT GTACCTCTGT TTTGGCCTTG GCGGCTTGTC AGCCGAAAAA TCAGGAAAAC
ACCGACTCTA ATGACGCTCA AAGTACGGAA ATGACTGACC ATGAAAAAAT GGGGCATACA
GACGCTGATC ATGACAGTGA TGAGCATGAG CTACAGATGC AAGATAGCCA TGAAGGCCAT
GATATGAGTA CTGCCGCCAC TACTGAGTTT GGTAAAGAGT ACATGGACGA GATGGATGAC
ATGCATGAAG ATATGATGGA AGCATTACAA AGCCATGATG CTGATGTCAC TTTTGCCAAA
GGCATGCTTG CTCATCATGA AGGCGCCCTA GATATGGCAG AGATTCAGTT AAAATATGGC
AAAGACGACA CCATGCGTAA ATTAGCTCAA GACGTTATGA GCGCCCAACA AGTCGAAATT
GATCAAATAA AAGCGTGGCT TAACGCCCAT CCTGACAGCA CAGAACAAGA CTATAATAAA
GAGATGCAGC AAGCCTATAG CAGTGGTATG GATGCCGTGC ATGATGAGAT GATGCAAGGC
TTACTTGAGG CAGATGCCGA CATGGCATTT GCCAAAGGTA TGCTTGCACA TCACAAAGGT
GCGATAGCGA TGGCTGAAAC TCAGCTAAAA TACGGTAAAG ATGAGGCCAT GCGCAAATTG
GCTGAAGACA TTATCAGCGC CCAGCAAGCC GAAATTGATC TGATGCAAAA ATGGGTAAGT
AAGTCTGCTT AA
 
Protein sequence
MTIKTHPFNK KTLKTKQLTL AALCTSVLAL AACQPKNQEN TDSNDAQSTE MTDHEKMGHT 
DADHDSDEHE LQMQDSHEGH DMSTAATTEF GKEYMDEMDD MHEDMMEALQ SHDADVTFAK
GMLAHHEGAL DMAEIQLKYG KDDTMRKLAQ DVMSAQQVEI DQIKAWLNAH PDSTEQDYNK
EMQQAYSSGM DAVHDEMMQG LLEADADMAF AKGMLAHHKG AIAMAETQLK YGKDEAMRKL
AEDIISAQQA EIDLMQKWVS KSA