Gene PsycPRwf_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1513 
Symbol 
ID5205683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1848287 
End bp1848946 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID640599733 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001280406 
Protein GI148653313 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG CAGCATATTG GCAATATACC GACATTGTTA CTAAGTTTTT GTTCTTTAGC 
TTGCTAGGCT TATCAATAGC CTCGTGGATT GCAGGCATTT TGCGCCTTTA CCAAAGTAGC
CAGCTGAAAA GCACAGTGGC CACAGATTTG ACGCAAGCGG TCAGTGCAGA GTCAAAAAAC
TTGTCAGCAC TTGGTAGTTC AGAGCGCAAA ACTGTGGTTG AGCAGGTGTT GATGAAAGAG
ATTGGCCGCT ATCGTTATTC GGGGGAAAAG GGTCTGGCCA TACTGGGTAC CACAGCCGCC
ATTGCTCCTT TTATTGGGTT GTTCGGGACG GTTTGGGGTA TCTTCCATGC TTTACATAGC
ATTGGTGAGT CAGGTCAAGC CGGTCTTAGT CAAGTGGCAG GTCCTGTAGG TGAGGCACTC
ATCATGACAG GTCTGGGTCT GGCTGTGGCC ATTCCTGCAG TTATTTTTTA TAACATCGCC
ATTCGTATTA ATCGCCGCAC CTTATTTATT GCCAATGACA CCGCTTATGG TCTACTCGGT
GACACAGCTA AGCCTATGAA TAGCGGTGCT GCTGCTCAGG TAGCGCTAAA GACACAGGCT
CAAAGCAGTA AAGATGGCGA TTATGCCTCG TTAAATACAT CCACTGCCAA CACTCACTAG
 
Protein sequence
MDFAAYWQYT DIVTKFLFFS LLGLSIASWI AGILRLYQSS QLKSTVATDL TQAVSAESKN 
LSALGSSERK TVVEQVLMKE IGRYRYSGEK GLAILGTTAA IAPFIGLFGT VWGIFHALHS
IGESGQAGLS QVAGPVGEAL IMTGLGLAVA IPAVIFYNIA IRINRRTLFI ANDTAYGLLG
DTAKPMNSGA AAQVALKTQA QSSKDGDYAS LNTSTANTH