Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1443 |
Symbol | |
ID | 5206472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1767158 |
End bp | 1767892 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599661 |
Product | ABC transporter related |
Protein accession | YP_001280338 |
Protein GI | 148653245 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.605121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAG TCTTGGTATT AGAAGGTATT AGCCACAGCT TTGGCGATAA GCCCATTTTT GACAATTTAA CGATGTCAGT GGCTAAGAAT GATGTGGTGA GTATTGTCGG TGCCAGCGGT GTGGGTAAGA CCACTTTGTT TAACATCGCA GCTGGCCTAT TGACCCCAAG CTTGGGCAAG GTGTTTATTA ATGGGGTGGA TACCACAGGG CAGGCGGGTA CAGTCGGCTA TATGCTACAA AAAGATTTGC TGCTGCCGTT TAAGACGGTG TTTGATAACA TTGCTTTGCC TTTAACCTTG AGGGGCTATA GCAAAGACAA GATAAAGCAG ATTGTGACAC CACAGTTGGC ACGTTTTGGC TTAGAAGGTT TGGGAGATCA GTATCCACAG ACCTTATCGG GTGGTCAGCG TCAGCGTGCA GCACTCTTGC GCACTTATTT AAGTGATAAC CCAATTATGC TGCTCGATGA GCCATTTTCA GCCTTAGATT TTGTGACCAA AGATGAGATG TATCACTGGT TTAGTCAGCT ACAAAAACGC TTAGCGTTAA CCTGTCTCAT CATTACCCAT GATATTGATG AGGCGATCTA TTTGTCTGAT CATCTGTATG TGTTAAAAGG GGTGCCGGCT CAGTTAACCG AGCAATTTGC TATTCCTAAG CATGACGGGT TTTTGGACAG CCAAGAGTAT TTGATGTTAA AAAAGCAGAT TTTAACGGCC ATTCAAACCC TCTAA
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Protein sequence | MDKVLVLEGI SHSFGDKPIF DNLTMSVAKN DVVSIVGASG VGKTTLFNIA AGLLTPSLGK VFINGVDTTG QAGTVGYMLQ KDLLLPFKTV FDNIALPLTL RGYSKDKIKQ IVTPQLARFG LEGLGDQYPQ TLSGGQRQRA ALLRTYLSDN PIMLLDEPFS ALDFVTKDEM YHWFSQLQKR LALTCLIITH DIDEAIYLSD HLYVLKGVPA QLTEQFAIPK HDGFLDSQEY LMLKKQILTA IQTL
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