Gene PsycPRwf_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1443 
Symbol 
ID5206472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1767158 
End bp1767892 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content44% 
IMG OID640599661 
ProductABC transporter related 
Protein accessionYP_001280338 
Protein GI148653245 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.605121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG TCTTGGTATT AGAAGGTATT AGCCACAGCT TTGGCGATAA GCCCATTTTT 
GACAATTTAA CGATGTCAGT GGCTAAGAAT GATGTGGTGA GTATTGTCGG TGCCAGCGGT
GTGGGTAAGA CCACTTTGTT TAACATCGCA GCTGGCCTAT TGACCCCAAG CTTGGGCAAG
GTGTTTATTA ATGGGGTGGA TACCACAGGG CAGGCGGGTA CAGTCGGCTA TATGCTACAA
AAAGATTTGC TGCTGCCGTT TAAGACGGTG TTTGATAACA TTGCTTTGCC TTTAACCTTG
AGGGGCTATA GCAAAGACAA GATAAAGCAG ATTGTGACAC CACAGTTGGC ACGTTTTGGC
TTAGAAGGTT TGGGAGATCA GTATCCACAG ACCTTATCGG GTGGTCAGCG TCAGCGTGCA
GCACTCTTGC GCACTTATTT AAGTGATAAC CCAATTATGC TGCTCGATGA GCCATTTTCA
GCCTTAGATT TTGTGACCAA AGATGAGATG TATCACTGGT TTAGTCAGCT ACAAAAACGC
TTAGCGTTAA CCTGTCTCAT CATTACCCAT GATATTGATG AGGCGATCTA TTTGTCTGAT
CATCTGTATG TGTTAAAAGG GGTGCCGGCT CAGTTAACCG AGCAATTTGC TATTCCTAAG
CATGACGGGT TTTTGGACAG CCAAGAGTAT TTGATGTTAA AAAAGCAGAT TTTAACGGCC
ATTCAAACCC TCTAA
 
Protein sequence
MDKVLVLEGI SHSFGDKPIF DNLTMSVAKN DVVSIVGASG VGKTTLFNIA AGLLTPSLGK 
VFINGVDTTG QAGTVGYMLQ KDLLLPFKTV FDNIALPLTL RGYSKDKIKQ IVTPQLARFG
LEGLGDQYPQ TLSGGQRQRA ALLRTYLSDN PIMLLDEPFS ALDFVTKDEM YHWFSQLQKR
LALTCLIITH DIDEAIYLSD HLYVLKGVPA QLTEQFAIPK HDGFLDSQEY LMLKKQILTA
IQTL