Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1438 |
Symbol | |
ID | 5206609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1762060 |
End bp | 1762872 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640599656 |
Product | DNA replication initiation ATPase-like protein |
Protein accession | YP_001280333 |
Protein GI | 148653240 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000684116 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATC AATTAAGTTT AAATCTAGAA GTAAGGAAAG ATGCTAGCCT AAGTGATTTT GCTGGCCCGG GTTGGTCGAC TTTAATAGAT GCTGTGCGTC AGATGCATGT GGGTTTGATC GGGCAGATGT ATATCTTTGG CAGTGCTGCT ACTGGTAAAA CCCATTTATT GTCGGCCATT TGTGAGTCTT ATATGGAGAT GGATAAGTCG GCAATCTGTC TGTCTTTAAA AGAGCTGCTA CATACTGATG TGGCGGTATT AGCTTCGTTA GAGAGCTTTG ATTTGGTTGC CATTGATGAT TTGGAGGCAA TTAAAGACAG CCGTGAGTGG CAAGAGGCCA TCTTTCACTT GATTAATCGT AGTCGAGAGG GACGTGGTCA GCTTATTTTT GCGGCCAAAA CCCCCGCGAC CGAGCTGCCT TTTGAGTTGC CTGATTTATT GACCCGTCTC ATTCAGTCTC CGGCCTTTAG AGTGCCTGAA GGTCACGATA TAGCAGATAG GAAGGCCATG CTTGAGTCAA TTATGCGCAG GCGGGGCTGG CAGTTTGATT CACGTATTAC AGAGCATTTA TTAGAAGAGG GACCACACCG TATCGGTGGT ATGCTCGATG TGCTCAACGT AATTCAACCG CTATTTTCTA ATCTAAACCG TGCTTATGTC TCAAAATCTG TGATTAGCCA AGCGATTACT ATGATTGATG AGCATACCTT AATGGCTGAG CTTGAGGATA TTCATCAAGA AGCACAAGAA GACTTTTTAT CTAAGTCTGA AGAAAACAGC GCTTACCGCG ACAATATGAC TTTTAATTTT TAA
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Protein sequence | MTNQLSLNLE VRKDASLSDF AGPGWSTLID AVRQMHVGLI GQMYIFGSAA TGKTHLLSAI CESYMEMDKS AICLSLKELL HTDVAVLASL ESFDLVAIDD LEAIKDSREW QEAIFHLINR SREGRGQLIF AAKTPATELP FELPDLLTRL IQSPAFRVPE GHDIADRKAM LESIMRRRGW QFDSRITEHL LEEGPHRIGG MLDVLNVIQP LFSNLNRAYV SKSVISQAIT MIDEHTLMAE LEDIHQEAQE DFLSKSEENS AYRDNMTFNF
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