Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1277 |
Symbol | |
ID | 5204663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1573035 |
End bp | 1573718 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640599496 |
Product | hypothetical protein |
Protein accession | YP_001280173 |
Protein GI | 148653080 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.136895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAA ATATTAGAGA AAATATCAAG AGGTTACAAG GGCAGGCTGG TGCCAAAGCC GATGGATTAT GGGGTCTGAA CTCGCAAAAA TCTTTGACTG ATTCTGGCAA GCGACTTGCC TATGAGCCGG GCAAACTTGC TAAACACTTT GGACCATTAA AGCAATCCCA GGTTAATGGG TTTGATAGTA TTTTAGAAGC CTGCAACCAA TACGGCGGCA ATGCTATTAA TCCGCTTTAT TTTGCTTATA TGCTAGCTAC TACCTGGCAT GAAACAGCAA GAACCATGAG GCCCATCGAA GAATACGGCA AAGGCCGTGG TAGGCCTTAT GGTAGTCGTA TTGATATCCA TGGCGGTAGG TACTCTGATT TACTTCCAAT TTACTATGGC CGTGGTTATG TGCAGCTAAC CTGGTTAACA AACTATGTCG TGATGCGTAA ATTACTAGGT GTAGATTTTG TGAATAAGCC TGAACTGGCA CTAGACCCAA AACATGCAGC AGATATTATG ATCGTTGGCA TGCTGGAAGG TCATTTCACT GGCAAATCAC TATCAAGATA CATAAGATAT GGCTCGTTTG AGCAGTTTAA AAACGCTCGT CGAGTCATTA ACGGTACTGA CAAAGACACA CTGATAGCAG GGTACGCAAT CAAATTTTTA GACTGCCTGA CGCTGATCAA ATAA
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Protein sequence | MTANIRENIK RLQGQAGAKA DGLWGLNSQK SLTDSGKRLA YEPGKLAKHF GPLKQSQVNG FDSILEACNQ YGGNAINPLY FAYMLATTWH ETARTMRPIE EYGKGRGRPY GSRIDIHGGR YSDLLPIYYG RGYVQLTWLT NYVVMRKLLG VDFVNKPELA LDPKHAADIM IVGMLEGHFT GKSLSRYIRY GSFEQFKNAR RVINGTDKDT LIAGYAIKFL DCLTLIK
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