Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1272 |
Symbol | |
ID | 5205847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1567080 |
End bp | 1568357 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640599492 |
Product | phage integrase family protein |
Protein accession | YP_001280169 |
Protein GI | 148653076 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000707551 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA AGCTAACGAA GAAGTTTATT GATGATCTAC CACTTACTGA AAGTGGCTAT AAGATATATC CTGATGAAGC TTTGACGGGT TTTGCATTAT ACGTTGGCAC TAAGAGCAAG CGTTATATTT TGAACAGACG TATTAACAAA AAAATGTACC GCACGCTAGT TGATGAAGTT CACATGACTA CTCTAACAGC CGCACGTGAA AAAGCAACTG CAATGATGGT AAATATCAGA CAAGGATCAC ACCCTTACGA GGGATTGCAT GAGCTACCAG AGATTGAAGA TGAAGAGAGC AAGGCACCAC AAGTACCTAC TTTGCTAGAG GCTTATAATT ATTTTAAAGA AATGAAATCA GAGCTTTCAG ATGGAACTAT AACAACCTAT GACCGACAGA TATTAGGTAA GCTTAGTGAC TGGCTTGATA AGCCACTTAA CGATATAACC AAGGCCATGA TCAGCAAAAA ACATAAAGAA ATAAGTGCCA ATAGCAAGGC TCAAGCTAAT GCGACTATGA GGGCATTAAG ATCAGTTTGG AATTATTGTA GAGATAGTTT TTTAGACGAG AATGAAGACT TCATAATCAA AGAACAGCCT ATCAAGATAC TTAATGCCAA AAAGGACTGG AATAATATAA AACCACGTAC CAGGCATGTA GCAGAAGAAA ATCTAGGCCA GTTCTTTAAG ACATTACTAA AATACACCGA TCGCAGCTCG CACATGCAAG CACCACATAG TAATAATGCT CGCGATCTTA TGCTAATGTT TATGCTAACT GGCGTGAGAC TTAATGAAGG TCAAAATCTT GAGTGGTCCG ACGTTGATCT TGATAACGGT TATATCGTAT TTAGAGATAC AAAAAACGGA TCAGATTATG ACATGCCACT GGGCAAAATA CTTGCAGCAT TACTCAAAGA ACGCAAGAGG TTAAGTGATG GTAGTCGTTG GGTTTTCCCA AGTAGTCAAA GCAATACTGA CGGACCTATA ACTGACTTAA CCCGTAGCTA CAAACGCATT GGTGAGTTAA ATGGCATGTA TATCACACCC CACGATTTAA GGCGCACGTT TGGCACCGTG GCCAACAGCT TGAACATCAA CTACCCAGTC CTTAAAAGGC TGTTAAATCA TCGTGAGACC AAGGCAACCG ATGATGTGAC ATTGCAGTAC GTGCAAGTGT CCCAGAAGCA GCTTAGAACG GCTTTAAATC AGATTGAGAA ACTGTATTGC AAGCAAGCTG AAATGACTCA AGATGAAGTT ATAGCAAAAC TCATATAA
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Protein sequence | MKVKLTKKFI DDLPLTESGY KIYPDEALTG FALYVGTKSK RYILNRRINK KMYRTLVDEV HMTTLTAARE KATAMMVNIR QGSHPYEGLH ELPEIEDEES KAPQVPTLLE AYNYFKEMKS ELSDGTITTY DRQILGKLSD WLDKPLNDIT KAMISKKHKE ISANSKAQAN ATMRALRSVW NYCRDSFLDE NEDFIIKEQP IKILNAKKDW NNIKPRTRHV AEENLGQFFK TLLKYTDRSS HMQAPHSNNA RDLMLMFMLT GVRLNEGQNL EWSDVDLDNG YIVFRDTKNG SDYDMPLGKI LAALLKERKR LSDGSRWVFP SSQSNTDGPI TDLTRSYKRI GELNGMYITP HDLRRTFGTV ANSLNINYPV LKRLLNHRET KATDDVTLQY VQVSQKQLRT ALNQIEKLYC KQAEMTQDEV IAKLI
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