Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1219 |
Symbol | |
ID | 5205564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1499732 |
End bp | 1500307 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640599440 |
Product | hypothetical protein |
Protein accession | YP_001280118 |
Protein GI | 148653025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.203152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGATA AAAGTATTAA ACAAAAACTA AGCACATCGT TAGATGATAT TGCTCTTAAA GCTCAAATGT TAGTTGCAAA TTTAAAAGAA GGGGGAGATG ACGGGTATGA TCATTCAGTA ACTTCTGCGG GCGAAAAGGG TCTTAAATCA GGAAAGGTAT CAGAGCTTAC AGTTATTGCA CCTTTGAAAG AAGGCGGAGC CGCGAGAATG CGTCGTATCC TTGAAATTAC CAAAGGTGAT TTAGCTGGGG CTACTAATGT AGGCACATTA CATGACTTAC GTATTGTATT TTTAGATAAC GACACTAAGA TTTTATTTTG TACTGCCTAT GATGGCCAAT GGGATCCGTA CATTAATGAT TTCGCCACCA AGATTCCTGA ATTGATGGAT TTAATATTTG GAAACGTTGA GGGCTGGCCA GGTATTAAAA GTCCCACGGT TAAGCAATTC ATTTTAGATC ATCAGGTTAC TGCTACTGGC TGGTATGTGG GGGTGCCTCA TTTAACCATA CGAGATATCA TGCGACATGA TAAGATCGTG AAAGGCATTA ACAAAGCTTT AGATGATGCG CAATAA
|
Protein sequence | MSDKSIKQKL STSLDDIALK AQMLVANLKE GGDDGYDHSV TSAGEKGLKS GKVSELTVIA PLKEGGAARM RRILEITKGD LAGATNVGTL HDLRIVFLDN DTKILFCTAY DGQWDPYIND FATKIPELMD LIFGNVEGWP GIKSPTVKQF ILDHQVTATG WYVGVPHLTI RDIMRHDKIV KGINKALDDA Q
|
| |