| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1197 |
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| Symbol | prpB |
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| ID | 5205585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1463221 |
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| End bp | 1464114 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599417 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001280096 |
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| Protein GI | 148653003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTT ATTCTGCCGG CAAGCGCTTT CGCGAAGCCC TCTTAGCACA AAAATCAAAT
AACCAGCCGC TACAAATTGT CGGTACCATC AACGCCTATA CCGCCATGAT GGCCAAACAA
GTTGGTCACA AAGCCATTTA CTTATCAGGT GCTGGCGTGG CAAACGCCTC ATACGGCCTA
CCAGACTTAG GCATGACTAG CCTTGATAAC GTATTAGAAG ATGCCAGCCG TATTACCAAT
GCGGTGGATA CACCACTATT GGTCGATATC GATACCGGTT GGGGCGGTGC ATTTAATATC
TCGCAAACCA TCAAAAAGAT GGAAAAAGCA GGTGTTGCTG CCGTGCATAT TGAAGACCAA
GTGGCACAAA AGCGCTGTGG TCACCGTCCA AACAAAGAAA TCGTTTCAAC CGCCGAAATG
GTTGACCGTC TTAAAGCGGC GCTTGATGCC AAAGTCGATC CAGACTTTGT GGTGATGGCA
CGTACTGATG CCCTATCGGT CGAAGGCTTA GAAGCAGCTG TTGAACGTGC CGTGGCTTTT
GAAGAAGCTG GCGCCGATAT GATTTTCGCT GAAGCATTAA CCGATATCGA GATGTATCGT
AAATTCACCG ATGTATTAAA TATCCCCGTA CTCGCCAACA TGACTGAGTT TGGCCAGACT
GACTTATACA CCACAGAGCA GCTATTTAAT GTGGGCGTCG ATATGGTGTT ATACCCACTA
TCGGCCTTTC GTGCGATGAA CAAAGCGGCG CTAAACGTGT ATCAGCATCT ATTAAATGAT
GGTACTCAAG AAGCTGTGGT CGATACCATG CAGACGCGTA TGGAGCTATA TGACTTCTTA
AATTATCACC AGTTTGAACA AAAGCTAGAT GAGCTGTTTG CTCAAAAGAA GTAA
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| Protein sequence | MSTYSAGKRF REALLAQKSN NQPLQIVGTI NAYTAMMAKQ VGHKAIYLSG AGVANASYGL
PDLGMTSLDN VLEDASRITN AVDTPLLVDI DTGWGGAFNI SQTIKKMEKA GVAAVHIEDQ
VAQKRCGHRP NKEIVSTAEM VDRLKAALDA KVDPDFVVMA RTDALSVEGL EAAVERAVAF
EEAGADMIFA EALTDIEMYR KFTDVLNIPV LANMTEFGQT DLYTTEQLFN VGVDMVLYPL
SAFRAMNKAA LNVYQHLLND GTQEAVVDTM QTRMELYDFL NYHQFEQKLD ELFAQKK
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