Gene PsycPRwf_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1158 
Symbol 
ID5206561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1416252 
End bp1417511 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content49% 
IMG OID640599378 
Producthypothetical protein 
Protein accessionYP_001280057 
Protein GI148652964 
COG category[S] Function unknown 
COG ID[COG5505] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATT TATCTCATCT ACTTGCCTCA GTCACGGCCA TTGAAAGCTT GCCATTAGCT 
TTTGGCATCA TCATGGCCGT TATTGGCTTG GTTTTTTATA CCCAAGGCCT ACCGGGCAAA
TTCTGGCGCA GGTTTTATGC GGTATTACCC GGCATCGTAC TGTGCTGCTT TATTCCTGCT
ACTTTAAATA GCTTAGGGGT GTTTGCAGAA GGTATTGGCT CGCAAATATA TAACTTTACC
GCCACTTATT TATTGCCTGC CAGCTTACTG CTGATGACAC TGTCGATGGA TGTGCCTAAG
ATTTTGGGAT TGGGCTGGAA AGCCATTGCC ATGTTCTTTG CAGCAAGCTT TGCCATTATC
ATCAGTGGGC CGATAAGCTT AGGCATTGCC AAATGGATCT CTCCTGAGAT GTTTATGGAT
GACACTTTAT GGCGGGGGTT TTCGGCAGTG GCCGGCAGCT GGATTGGTGG TGCGGCCAAC
CAAGCGGCCA TGAAGGAGCT GTTTGGGGTC AGTGATGACT TGTTTGGCAT GATGATATTG
GTTGATACCA CCAATGCCTC TTTATGGCTA TTGGCTATCT TGGTGATGGC CAAACACAGC
GAGAAAATTG ATAAGTTTTT GCGTGCAGAT ACCGGCAGTA TTGAAAAAGT GGTGGCAGCG
GTTGAGAGCT ATGAGCGCGA TAATGCGCGC CCCGGCAGCT TAAATGACTT GATGGTAATG
TTTGGTCTGT GCTTTGCTAT GGTGGGTTTG GCGCACTTCT TGGGCGCAGA GATTGCTGGC
TTCTTCTCGC CGTATACTTG GGCGGTGCAA TACAGCTTTG CCAGCTCGTT CTTTTGGATG
GTGGTTATCA TTACCTTAAT TGGTGTGGGT TTCTCCTTTA CGAAGGTGCG CCGCTTAGAC
CATATTGGCG CCTCAAAAAT GGGCACAGTG TTTATCTTTA TTCTGATTGC TGCCATTGGC
ATGCAAATCA ACCTAAATGG CCTCGTCTCT CAGTGGCGCC TGCTACTTAT TGGTCTATTA
TGGATGTGTA TCCATGTGGT GATTGTCTTT ATCGTGGCAA GGCTTATCCG GGCGCCTTTC
TTCTTCTTAG CCGTGGGCTC GAATGCCAAT ACTGGCGGCG CCTCTTCAGC CCCTATTGTG
GCCACGGCCT TTCATCCATC ACTTGCGCCT GTGGGGGTCT TCTTGGGAAT ATTGGGCTAT
GCGGTGGGTA CTATTGGCGG TTATGTTAGT ACACAGCTTA TGCGTTTGGT TGTGGGGTAG
 
Protein sequence
MPDLSHLLAS VTAIESLPLA FGIIMAVIGL VFYTQGLPGK FWRRFYAVLP GIVLCCFIPA 
TLNSLGVFAE GIGSQIYNFT ATYLLPASLL LMTLSMDVPK ILGLGWKAIA MFFAASFAII
ISGPISLGIA KWISPEMFMD DTLWRGFSAV AGSWIGGAAN QAAMKELFGV SDDLFGMMIL
VDTTNASLWL LAILVMAKHS EKIDKFLRAD TGSIEKVVAA VESYERDNAR PGSLNDLMVM
FGLCFAMVGL AHFLGAEIAG FFSPYTWAVQ YSFASSFFWM VVIITLIGVG FSFTKVRRLD
HIGASKMGTV FIFILIAAIG MQINLNGLVS QWRLLLIGLL WMCIHVVIVF IVARLIRAPF
FFLAVGSNAN TGGASSAPIV ATAFHPSLAP VGVFLGILGY AVGTIGGYVS TQLMRLVVG