| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1140 |
|---|
| Symbol | |
|---|
| ID | 5206921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1395812 |
|---|
| End bp | 1396342 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599360 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001280039 |
|---|
| Protein GI | 148652946 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.647327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCC TAAAAATATT ATATATATGC ACCCACAACC GCTGCCGTAG TGCCTTATCA
GAGGCCATTA CCAATCAATA TCAGCCTCAA CAAGGCGCAC AGAGCAAGAC AGACCAGAAG
TTATTAGTGG CTAAGAGTGC AGGAAGTGCG CCGGTGGGGC AGGTACATCC TTTAACTTTA
GAGTATCTAA CGCAGGCAGG CTATAGCGTA GAGGGGCTAA CCAGCAATGG TTGGGATGAT
AAGGAGTATA TGCAAGGCTT TGAGCCGGAT GTGTTAATCA CTGTGTGTGA CAATGCGGCA
GGCGAGCAGT GTCCGCTGTG GCTAGGTAAT ATCCCTAATC TGGTCAAGCT ACATTGGGGA
TTGTCTGATC CTTCAAAAGA TACGCAAGAT GCAACAAAAA CTGCTCAAAA CTTCGCTAAG
ACCATTGCTA TCATTGAGCA AAGAGTCGCC AAGTTACATC AGATTGCCAG CGCTGAGCTG
TCAGCTGAGG CGCGCAAACA GGCGCTGCTT GATTTGGTAC ATCACGTTTA A
|
|---|
| Protein sequence | MTPLKILYIC THNRCRSALS EAITNQYQPQ QGAQSKTDQK LLVAKSAGSA PVGQVHPLTL
EYLTQAGYSV EGLTSNGWDD KEYMQGFEPD VLITVCDNAA GEQCPLWLGN IPNLVKLHWG
LSDPSKDTQD ATKTAQNFAK TIAIIEQRVA KLHQIASAEL SAEARKQALL DLVHHV
|
|---|
| |