Gene PsycPRwf_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1101 
Symbol 
ID5204731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1349876 
End bp1351078 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID640599322 
Productmethyltransferase small 
Protein accessionYP_001280001 
Protein GI148652908 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGTAG CAACAAGACA GTATGTTCAA TGGCAAGAAA ATGGCAGTCT ACACCGTGCA 
CAATGGCTCT CACAGAGCAA TCATGGTCCG CCTGCCCGCA TCGTTATCAT CGATGACACC
ACCACGGCAG ATACCGCCTA CCGCTTAGCC AATGCCGGCA CTTCTATGCT GTGGCGAGGC
GACTTTCATA ATGCCAAGCA ATTAATTCAA GCCCTGCAGC GCCGTATTGA TCGTGCTGAG
CTGCGCAAGG CTGAAAAAAC CGCAAAAAAA GCCGCTCAAG CAGTGACTGA TTCAATGAGG
GGTGACTCAA AGCCGGTGAG TGCGTCACAA CACCTGCCGA ATCTATTTCA TAAAAACCGT
TTGGCGCAAA CTCAGCGCTC TCGAATATTA AGCCGCCTAC TATTACATTT CGATGCCAGT
TATCAACTCA ATCTAGGCCG CGCCCCTGAG GTCAGTGAGG CTTGTACAGC TGCCTTTGGT
AAGATGGATG AGGCATGCGT GTTGTCTTTT CGTGACTTGC AGGGCGCATT GGGTGCCGCG
CAGTGGCGCA AAAAAGGCGT TCCCGTTGAG GCTCTAGGCG TATCAATTCA CCCTCATTAC
GGTGTGTTCG CACCAACCCG CCAAGAATAT GTGCAGCTGC TACTTGATGC ACCTATGCCA
AAGCCTTGCG ATATCGCCTA TGACATTGGT ACCGGTACGG GTCTATTATC CATTGTTCTG
GCGCAGCGTG GTGTAAAAGA AGTGATTGCC ACTGATTTAA ATCCCCGCGC ATTAGACTGT
GCCGATGATA ACTTCGAACG CCTGCAAATT GAACAGGTAC AGCTGCAGCA AATAGATCTG
TATCCCAAGC AAGCGCCGCT GGCTAATTTG ATTGTCTGTA ACCCGCCTTG GCTGCCCGCC
AAACCCAGCT CACCGTTAGA GTATGCAGTA TATGATGCCA ATAGTGCGAT GTTGCGTGGT
TTTTTTATGG GCGCAAAGTC GCATCTGGCC GACAACGGTG AAGTCTGGTT GATCTTGTCA
GATTTAGCCG AACATTTACA GCTACGTAGC CGTGAAGAGT TACTTGGCTG GATAGAGGAG
GCCGGCTTAA AGGTCAAATA TCGCTTAGAT ACTGAGCCAA CCCATGGCAA AAGCCAAGAT
GAAAGCGATC CATTATTTGA GGCGCGCCGT GCTGAGGTGA CTTCGCTGTG GTGTTTGTAT
TAG
 
Protein sequence
MLVATRQYVQ WQENGSLHRA QWLSQSNHGP PARIVIIDDT TTADTAYRLA NAGTSMLWRG 
DFHNAKQLIQ ALQRRIDRAE LRKAEKTAKK AAQAVTDSMR GDSKPVSASQ HLPNLFHKNR
LAQTQRSRIL SRLLLHFDAS YQLNLGRAPE VSEACTAAFG KMDEACVLSF RDLQGALGAA
QWRKKGVPVE ALGVSIHPHY GVFAPTRQEY VQLLLDAPMP KPCDIAYDIG TGTGLLSIVL
AQRGVKEVIA TDLNPRALDC ADDNFERLQI EQVQLQQIDL YPKQAPLANL IVCNPPWLPA
KPSSPLEYAV YDANSAMLRG FFMGAKSHLA DNGEVWLILS DLAEHLQLRS REELLGWIEE
AGLKVKYRLD TEPTHGKSQD ESDPLFEARR AEVTSLWCLY