Gene PsycPRwf_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1085 
Symbol 
ID5205327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1310612 
End bp1311892 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content48% 
IMG OID640599306 
Producthypothetical protein 
Protein accessionYP_001279985 
Protein GI148652892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.154352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCTA CGCCACATAT CTGCTATTTT CTTAATCCTC TAAACTCACA ACCTCATGCA 
TCATCTAAAG CTATGATAAA AATTGTTAAC GGTGTAAAAA ACCATTTTTC TTCTCAAACG
GCGCAAGCCA ATACTACAGC TATCAGTGCT ACAAAAACCC ATAACTGGCT AAAACTGAGC
AGTCCTTGGC TTAAAGCCGC TGCACTGACT GCCACATTAG GCGCTATGAG TGTGCCAGCT
TACGCTGCTT GTCAGGTGCC CAAAAGCTAC TACTCGAATG TGTTTTGTAC CTCAAGCAGC
AATCACTTCT TGGCACTCAA AGACTCAGGC CAACCCGTAG CACTACTAGA CAATAGGGGT
AGGCGAGTTG CTGACTTGTC TCGCTACACA GGTGTCGATG TCAGCAAAAT TAGTGAGGGC
CTTATACCTG TGCAGCGTAT GGGTAAGCTT GGTTATGTTA ACTTAGCGGG CCGAGAAATC
ATCCCCGCGG TCTATGATGT CATCCGAGGT GACAGTCAAA CCAGAGGCTG GGCCCGTGCT
GCTAATGGTA ACCGCATTGT GGTCAAAAAA GGGGGTATGT TTGGGGTGAT TGATATTCGC
AATACAGTGG TGTTACCGTT TTCGCCCAAT TATGTCAGTA TTAGTGACTT CTCTGGCAAC
CGAGCCAAGA TTACGACCCG TGCAGGTACG CAGTGGATTG ATGCATATGG TAAAGCCATT
GCAGCGCCTG CATCTGCTGC GACTCAGAGT ATAATGGCTC GTAATCCGTC AACACCTGTG
GTCAAAACCA CCACCAATAT TAAAGCGCCG CTACCTAGCA CTACGGCGCC GCGCACAACT
GTGGCTACCA GCCAGTCAGC GATAGAGGCA CTGAATGCGC TTCAGCGTCC AGAGGCCATC
AACTCAGGCC CTGTGGTTGC TCCAATGTCA TCGAGTGCAT CATCGGGTCC GGAGATTTGG
CAGCCTGAAC AGCGCGATGG TAAATGGGGC TTCGTTAACT ATAGCGGTGT GCCGATGATT
ACCTTCTCAT TTAATCAGGT CACCCCGTTT TCTGAAGGGT TAGCGGGCGT ACGTATGGGA
GATAAGTGGG GATTTGTAAA CTTGGCAGGT GAGTTGGTTA TTCCTTTTAA CTATACCGAG
TCTACAGTTC AGCGTATTCG CGGTGCTAAT TATAAAGGTG TCCAACCCTT TATGTTCACG
GGTGGAAAAG CCTGGGTCGG CAATACAGCC AATGGCGCAC AGATGTGTAT TGATACCGAA
GGTAAGTATG TTTCTTGTTA G
 
Protein sequence
MVSTPHICYF LNPLNSQPHA SSKAMIKIVN GVKNHFSSQT AQANTTAISA TKTHNWLKLS 
SPWLKAAALT ATLGAMSVPA YAACQVPKSY YSNVFCTSSS NHFLALKDSG QPVALLDNRG
RRVADLSRYT GVDVSKISEG LIPVQRMGKL GYVNLAGREI IPAVYDVIRG DSQTRGWARA
ANGNRIVVKK GGMFGVIDIR NTVVLPFSPN YVSISDFSGN RAKITTRAGT QWIDAYGKAI
AAPASAATQS IMARNPSTPV VKTTTNIKAP LPSTTAPRTT VATSQSAIEA LNALQRPEAI
NSGPVVAPMS SSASSGPEIW QPEQRDGKWG FVNYSGVPMI TFSFNQVTPF SEGLAGVRMG
DKWGFVNLAG ELVIPFNYTE STVQRIRGAN YKGVQPFMFT GGKAWVGNTA NGAQMCIDTE
GKYVSC