Gene PsycPRwf_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1066 
Symbol 
ID5205239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1286056 
End bp1286769 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content46% 
IMG OID640599287 
Productexonuclease, RNase T and DNA polymerase III 
Protein accessionYP_001279966 
Protein GI148652873 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.327766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT ATATTTTAGA CACCGAAACC ACAGGGCTGG TAGATCCACA TATGACGGAA 
GCGGCCTATA GCATTATTGC CATTAATAAT GCAAAAATCG AGGTTATCCA AGCCCCCCGA
TCCAAGCGCT TCAATCCACT AAAGCCGATA AGCTTAGGCT CTATGGCGAC CTCACACATT
TGTGATGAGG ATGTGGCTCA TGAACCGCCA CACACAGAGT TTCGTTTGCC AAACAGCGTC
GAATACCTAG TCGGCCATAA CATAGACTAT GATATGGCGG TACTAAAAAA TGCCGGCGTC
ACCCACACGC CCAAGCTCAT TTGTACCAAA GCGATGTCAA GCTATCTACT GCCGACTCTT
GAGAGTCATA AACTGGTATC ACTGCTGTAT CACTTTCACC GTCAAGTGGC ACGCGAGCAA
GCCAAGCACG CGCACGCTGC TATTTATGAC ATCTATTTTA CCCAGCTAGT ACTTGGCAGC
TTAATTGAGC TTGCCAATAG CCAAGGTCAT AACATTACGG ATGTTGAAAG CTTGTATCAA
TTTAGCGAAA TGGCGCGCAT CCCTACTCAC TTAAGCTTTG GTAAATATAA AGGCCAAGCC
ATTACTGAGT TAGCCGCAAG CTCTGATGGC GCAGGTTATC TAAAATGGCT TATGGGTCAA
GACAACATAG ACCCTTATTT GGCTGAGGCT TGCCAGCAAG CACTCAACTC TTAA
 
Protein sequence
MTTYILDTET TGLVDPHMTE AAYSIIAINN AKIEVIQAPR SKRFNPLKPI SLGSMATSHI 
CDEDVAHEPP HTEFRLPNSV EYLVGHNIDY DMAVLKNAGV THTPKLICTK AMSSYLLPTL
ESHKLVSLLY HFHRQVAREQ AKHAHAAIYD IYFTQLVLGS LIELANSQGH NITDVESLYQ
FSEMARIPTH LSFGKYKGQA ITELAASSDG AGYLKWLMGQ DNIDPYLAEA CQQALNS