Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1066 |
Symbol | |
ID | 5205239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1286056 |
End bp | 1286769 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599287 |
Product | exonuclease, RNase T and DNA polymerase III |
Protein accession | YP_001279966 |
Protein GI | 148652873 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.327766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTT ATATTTTAGA CACCGAAACC ACAGGGCTGG TAGATCCACA TATGACGGAA GCGGCCTATA GCATTATTGC CATTAATAAT GCAAAAATCG AGGTTATCCA AGCCCCCCGA TCCAAGCGCT TCAATCCACT AAAGCCGATA AGCTTAGGCT CTATGGCGAC CTCACACATT TGTGATGAGG ATGTGGCTCA TGAACCGCCA CACACAGAGT TTCGTTTGCC AAACAGCGTC GAATACCTAG TCGGCCATAA CATAGACTAT GATATGGCGG TACTAAAAAA TGCCGGCGTC ACCCACACGC CCAAGCTCAT TTGTACCAAA GCGATGTCAA GCTATCTACT GCCGACTCTT GAGAGTCATA AACTGGTATC ACTGCTGTAT CACTTTCACC GTCAAGTGGC ACGCGAGCAA GCCAAGCACG CGCACGCTGC TATTTATGAC ATCTATTTTA CCCAGCTAGT ACTTGGCAGC TTAATTGAGC TTGCCAATAG CCAAGGTCAT AACATTACGG ATGTTGAAAG CTTGTATCAA TTTAGCGAAA TGGCGCGCAT CCCTACTCAC TTAAGCTTTG GTAAATATAA AGGCCAAGCC ATTACTGAGT TAGCCGCAAG CTCTGATGGC GCAGGTTATC TAAAATGGCT TATGGGTCAA GACAACATAG ACCCTTATTT GGCTGAGGCT TGCCAGCAAG CACTCAACTC TTAA
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Protein sequence | MTTYILDTET TGLVDPHMTE AAYSIIAINN AKIEVIQAPR SKRFNPLKPI SLGSMATSHI CDEDVAHEPP HTEFRLPNSV EYLVGHNIDY DMAVLKNAGV THTPKLICTK AMSSYLLPTL ESHKLVSLLY HFHRQVAREQ AKHAHAAIYD IYFTQLVLGS LIELANSQGH NITDVESLYQ FSEMARIPTH LSFGKYKGQA ITELAASSDG AGYLKWLMGQ DNIDPYLAEA CQQALNS
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