Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0735 |
Symbol | |
ID | 5204475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 877225 |
End bp | 878058 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640598955 |
Product | regulatory protein, IclR |
Protein accession | YP_001279638 |
Protein GI | 148652545 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000567454 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGCAA AAGAATCAAC ACCTAAAAAT CAAAATGGCG TACAGTCGCT TGAGATCGGA CTCTCAATTT TAGATATACT CATTGATCAT CACGAACCTA TGATGCTCAA AGACATTGCT CAATCAATGG GAATGCATCC TGCAAAAATG CATCGCTACT TGGTCAGTCT CATTCGTAAA GACTATGCAC GAAAACTAAG TGATGGACGC TACGGACTTG GCAATCGAGG TAACACGCTC GGCCCCATCA GTCTGGATCA AGGCAGTCTT TTGCAGCGTA TCATGGACGC CGCAACCGAA ATCAAAGACA CGGTTCATTG CGGTGTACAA ATTGCCAAAT GGTTTAACGA GGGGCCAATT GTTATTCACT CGTTCGAACC CGACAGACCC ATCAGTATCA TTACTCGCAT AGGGTCGCGT ATGCCATTGA CGTCTTCTGC CACCGGTAGG CTATTTGCCA GCTATCAGCC TGATACCCTC ATTAAGCCAT TGGTGCGCTC AGAGTGGCAA GATGATGGGC ATAATCCTCT CTTTAATAAG CCTACTGATT TGAATGCTAA ATGGCAAGAT TTTACTCAGC TACAAACCGA TATTCGTTCG CAAGGTTATG CAACGGTGAC AGGTGATATG CTCATGGGTA TTAACGCAAT CAGTATTCCG GTTATCCCTT CAGCGCCTAA AGCCGATGAA ACTGAGCGCT CACTTATTGA ACAGACACCG CTGGAATATG CAATCACCAT TATTGGTACG CCTGAGCAAT TGCCGCTAGG TAACGGTGAC ATCATAGATG CCGTACGTTC AATCGCTAAG CGTTATCAGA TTAGCCAGTT TTAA
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Protein sequence | MSAKESTPKN QNGVQSLEIG LSILDILIDH HEPMMLKDIA QSMGMHPAKM HRYLVSLIRK DYARKLSDGR YGLGNRGNTL GPISLDQGSL LQRIMDAATE IKDTVHCGVQ IAKWFNEGPI VIHSFEPDRP ISIITRIGSR MPLTSSATGR LFASYQPDTL IKPLVRSEWQ DDGHNPLFNK PTDLNAKWQD FTQLQTDIRS QGYATVTGDM LMGINAISIP VIPSAPKADE TERSLIEQTP LEYAITIIGT PEQLPLGNGD IIDAVRSIAK RYQISQF
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