Gene PsycPRwf_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0721 
Symbol 
ID5206646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp862824 
End bp863372 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content44% 
IMG OID640598942 
Productisochorismatase hydrolase 
Protein accessionYP_001279625 
Protein GI148652532 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000150785 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACAA AAGTACTTAT CGTTGTAGAT ATTCAAAATG AGTATTTTCC GCAAGGTAAA 
TTATCACTCG TAGGTATCAA TGAAGCCGCT GATAATGCAG CTTTGGTTAT TGCGTCTGCT
AGAGAAAAAG GCCATACCGT CATTCATATC CGCCATGAAA TGCCCTCTAT TGATGCGCCG
ATATTTACGC CTAATACCGA TGGTGTAGAG ATCCATGAGA AGGTAAAACC GATAGAGGGT
GAAGTCGTCG TTGTGAAGCA TTATGCCAAT TCATTCCGTG AGACGACTCT GAAAGAGCTG
TTAGATAAAG AAGGCATTAA AGAGGTGACC GTAATTGGCG CCATGAGCCA CATGTGTATT
GATGCAACCG TTCGCGCGGC AGTGGACTTT GGTTATACCA CGACCACGAT TCATGATGCT
TGTGCCACGC TTGATCTTGA ATTTAATGGA ACGACCGTAC CCGCAGCGCA GGTTCATGCC
ACTATTATGG CAGCCATTGA GTTTATGTAT GGCGAAGTGA TTGATACCCA AACCTGGATT
GCACGTTAA
 
Protein sequence
MSTKVLIVVD IQNEYFPQGK LSLVGINEAA DNAALVIASA REKGHTVIHI RHEMPSIDAP 
IFTPNTDGVE IHEKVKPIEG EVVVVKHYAN SFRETTLKEL LDKEGIKEVT VIGAMSHMCI
DATVRAAVDF GYTTTTIHDA CATLDLEFNG TTVPAAQVHA TIMAAIEFMY GEVIDTQTWI
AR