| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0640 |
|---|
| Symbol | |
|---|
| ID | 5206382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 770731 |
|---|
| End bp | 771288 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640598856 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279545 |
|---|
| Protein GI | 148652452 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00713767 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGC TTATTCGTTT TTTTATTTTA TTGGCTTTAT TAAAACAAGA GTCAAAGCAG
CGGCCATCCG CTGACAGCGT CACCACCGCT CAAAAACCAA AACTCACACA AGCGGAGTTG
TTCACGCCCG TTAGCCGAAG CTATCGCGTA CTGCCGCATG ATATGGGGTT TCGAGATCAC
CTGCCCAACT ACCGCTATTT GTCTTTTGTT GAGCTCAATG TCACCGCTTG GCTGTACAAC
ATCCTCAAAA AAAATGGTCT AGGCGGGCTG AGCATGGACT GGATTATCTC GATGCAAGAG
ATGGTATATC TCAAACAAAT CAAGTTTTTG AGTAAAATGA CGGTGACCAG TACTTTAGAG
GGGTGGGGTG AAAAATACGT TTATTTTCAG CACCACTTTT ATGTCAAAAA TACGTTGATG
GCCGTTGGTC TCACCAAATT TGTGTTGATG AATAAAAAAG GCAAGCAGCT GCCCTCAAGT
ATTGGCATGC AAGGTGAGCA TTTGACCGAA GTTATTAACA CTTGGAATGC CAACCAAACT
GCTATCAAGT CTCAGTAA
|
|---|
| Protein sequence | MNMLIRFFIL LALLKQESKQ RPSADSVTTA QKPKLTQAEL FTPVSRSYRV LPHDMGFRDH
LPNYRYLSFV ELNVTAWLYN ILKKNGLGGL SMDWIISMQE MVYLKQIKFL SKMTVTSTLE
GWGEKYVYFQ HHFYVKNTLM AVGLTKFVLM NKKGKQLPSS IGMQGEHLTE VINTWNANQT
AIKSQ
|
|---|
| |